Gene omics information

Query gene ID	Ta.16326.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.3	Ta.16326.1.S1_at	BJ306642	-	-	1e+0	At5g23950	C2 domain-containing protein	S.X.	H.G.	Please select
0.44	64.5	Ta.27257.1.S1_at	BT009627.1	-	-	3e+0	At5g06320	NHL3	S.X.	H.G.	Please select
0.30	40.9	Ta.22722.1.A1_at	CA498647	-	-	4e-1	At1g03120	ATRAB28	S.X.	H.G.	Please select
0.27	35.6	Ta.26270.1.A1_at	CD490464	-	-	7e+0	At2g15830	unknown protein	S.X.	H.G.	Please select
0.21	25.5	Ta.14375.1.A1_at	BQ162246	-	-	3e-1	At4g27650	PEL1 (PELOTA)	S.X.	H.G.	Please select
0.19	22.4	TaAffx.20511.1.S1_at	CA725585	-	-	7e-11	At1g03000	PEX6 (PEROXIN 6)	S.X.	H.G.	Please select
0.16	18.2	Ta.24224.1.A1_at	BT009564.1	-	-	3e-1	At1g59640	ZCW32	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.1	98.1	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.6	97.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.6	97.8	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.2	97.5	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.9	96.1	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.5	95.4	GSM324490	Si+ B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.3	95.0	GSM298079	Leaf tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.3	95.0	GSM250907	Tc_7dpi_mock_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.9	94.0	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.8	93.6	GSM143524	Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.27	4e-59	228	Ta.16326.2.S1_at	CA604981	-	-	2e+1	At5g12240	unknown protein	C.G.	S.X.	Please select
0.27	4e-59	228	Ta.16326.2.S1_x_at	CA604981	-	-	2e+1	At5g12240	unknown protein	C.G.	S.X.	Please select
0.03	2e-2	40	TaAffx.91465.1.S1_at	BJ322681	-	-	7e-3	At1g27390	TOM20-2 (TRANSLOCASE OUTER MEMBRANE 20-2)	C.G.	S.X.	Please select
0.02	2e-2	40	Ta.16855.1.S1_at	BE401812	-	-	3e+0	At4g15460	glycine-rich protein	C.G.	S.X.	Please select
0.03	3e-1	36	TaAffx.58325.1.S1_at	CA620536	-	-	4e+0	At5g20900	JAZ12 (JASMONATE-ZIM-DOMAIN PROTEIN 12)	C.G.	S.X.	Please select
0.04	3e-1	36	TaAffx.51965.1.S1_at	CA715679	-	-	2e-1	At4g33960	unknown protein	C.G.	S.X.	Please select
0.04	3e-1	36	TaAffx.48020.1.S1_x_at	CD894142	-	-	3e-1	At3g14600	60S ribosomal protein L18A (RPL18aC)	C.G.	S.X.	Please select
0.04	3e-1	36	TaAffx.48020.2.S1_x_at	CA702141	-	-	2e-1	At3g14600	60S ribosomal protein L18A (RPL18aC)	C.G.	S.X.	Please select
0.04	3e-1	36	TaAffx.48020.2.S1_at	CA702141	-	-	2e-1	At3g14600	60S ribosomal protein L18A (RPL18aC)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e+0	34	Arabidopsis thaliana	At5g23950	832460	C2 domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.07	1e-4	48	Glycine max	Gma.16949.1.S1_at	BI945119	-	-	1e-4	At1g01650	aspartic-type endopeptidase/ peptidase	C.G.	S.X.	Please select
0.29	2e-89	327	Hordeum vulgare	Contig10061_s_at	Contig10061	-	-	3e-8	At1g01650	aspartic-type endopeptidase/ peptidase	C.G.	S.X.	Please select
0.08	6e-7	56	Oryza sativa	Os06g0730900	AK064963.1	-	-	4e-40	At1g63690	protease-associated (PA) domain-containing protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.08	6e-3	42	Populus trichocarpa	PtpAffx.119076.1.S1_at	CV282296	-	-	4e-19	At1g01650	aspartic-type endopeptidase/ peptidase	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.06	3e-4	44	Vitis vinifera	1607795_at	CF415624	hypothetical protein LOC100241031	-	3e-27	At1g63690	protease-associated (PA) domain-containing protein	C.G.	S.X.	Please select
0.07	3e-2	38	Zea mays	Zm.8709.1.A1_at	CF624906	-	-	6e-6	At1g01650	aspartic-type endopeptidase/ peptidase	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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