Gene omics information

Query gene ID	Ta.16251.3.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.16251.3.S1_x_at	CA733104	-	-	8e-1	At5g48335	unknown protein	S.X.	H.G.	Please select
0.91	98.2	Ta.16251.2.S1_x_at	CA603407	-	-	7e+0	At5g56070	unknown protein	S.X.	H.G.	Please select
0.80	92.2	Ta.16251.1.S1_at	CD896608	-	-	1e+0	At5g48335	unknown protein	S.X.	H.G.	Please select
0.80	92.2	Ta.16251.2.S1_a_at	CA603407	-	-	7e+0	At5g56070	unknown protein	S.X.	H.G.	Please select
0.67	86.3	TaAffx.37775.1.A1_s_at	BJ266103	-	-	1e+0	At4g19200	proline-rich family protein	S.X.	H.G.	Please select
0.33	46.9	Ta.28600.1.S1_a_at	BE443069	-	-	2e-9	At3g45010	scpl48 (serine carboxypeptidase-like 48)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.5	98.9	GSM138153	genotype G32 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.3	98.2	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.5	97.8	GSM138211	genotype B65 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.3	97.6	GSM111236	genotype F38b developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.9	97.3	GSM138154	genotype H5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.8	97.2	GSM138184	genotype C25 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.8	97.2	GSM138149	genotype F29 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.4	96.8	GSM138175	genotype A81 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.0	96.3	GSM138157	genotype DH91 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.0	96.3	GSM111227	genotype F48 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.54	1e-147	521	Ta.16251.1.S1_at	CD896608	-	-	1e+0	At5g48335	unknown protein	C.G.	S.X.	Please select
0.57	1e-147	521	Ta.16251.1.S1_a_at	CD896608	-	-	1e+0	At5g48335	unknown protein	C.G.	S.X.	Please select
0.62	2e-91	335	Ta.16251.2.S1_a_at	CA603407	-	-	7e+0	At5g56070	unknown protein	C.G.	S.X.	Please select
0.62	2e-91	335	Ta.16251.2.S1_x_at	CA603407	-	-	7e+0	At5g56070	unknown protein	C.G.	S.X.	Please select
0.01	2e-1	36	Ta.18858.1.S1_x_at	CA738706	-	-	3e-1	At3g10970	haloacid dehalogenase-like hydrolase family protein	C.G.	S.X.	Please select
0.03	9e-1	34	TaAffx.92543.1.S1_at	BJ259898	-	-	1e+0	At1g52590	-	C.G.	S.X.	Please select
0.03	9e-1	34	TaAffx.8294.1.S1_at	CA627820	-	-	4e+0	At1g55300	TAF7 (TBP-ASSOCIATED FACTOR 7)	C.G.	S.X.	Please select
0.04	9e-1	34	TaAffx.32621.1.S1_at	BJ272659	-	-	1e-1	At3g42310	unknown protein	C.G.	S.X.	Please select
0.04	9e-1	34	TaAffx.24534.1.S1_at	CA717865	-	-	1e+0	At1g66890	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	8e-1	34	Arabidopsis thaliana	At5g48335	2746200	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	1e+0	34	Glycine max	PsAffx.psHB030xG02f_at	PsAffx.psHB030xG02f	-	-	4e+0	At5g45550	mob1/phocein family protein	C.G.	S.X.	Please select
0.77	2e-163	573	Hordeum vulgare	Contig22239_at	Contig22239	-	-	9e-1	At5g48335	unknown protein	C.G.	S.X.	Please select
0.30	3e-51	202	Oryza sativa	Os10g0359200	9638.m01800	-	-	6e-1	At4g02380	SAG21 (SENESCENCE-ASSOCIATED GENE 21)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.09	1e-6	54	Populus trichocarpa	PtpAffx.204198.1.S1_at	pmrna8263	hypothetical protein	-	5e-32	At4g34320	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	6e-2	36	Vitis vinifera	1616071_at	CB978649	hypothetical protein LOC100259260	-	5e-58	At3g18480	AtCASP (Arabidopsis thaliana CCAAT-displacement protein alternatively spliced product)	C.G.	S.X.	Please select
0.04	4e-1	34	Zea mays	Zm.16508.4.S1_at	CF017029	60S ribosomal protein L39	-	4e-12	At4g31985	60S ribosomal protein L39 (RPL39C)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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