CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.15614.1.A1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.2 Ta.15614.1.A1_at CA485825 - - 1e+0 At1g01470 LEA14 (LATE EMBRYOGENESIS ABUNDANT 14) S.X. H.G.
0.35 49.8 TaAffx.82721.1.S1_at CA668034 - - 3e+1 At4g20780 calcium-binding protein, putative S.X. H.G.
0.26 33.6 TaAffx.85941.1.S1_at CA618291 - - 2e+1 At5g23760 heavy-metal-associated domain-containing protein S.X. H.G.
0.23 29.0 TaAffx.65688.1.S1_x_at BJ232502 - - 2e+1 At3g02480 ABA-responsive protein-related S.X. H.G.
0.23 29.0 Ta.21581.1.S1_at CA696527 - - 4e+0 At2g36460 fructose-bisphosphate aldolase, putative S.X. H.G.
0.07 8.6 TaAffx.3664.1.S1_at CD876496 - - 2e+0 At2g47710 universal stress protein (USP) family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
16.1 99.6 GSM298070 Leaf tissue of Paragon at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
15.2 99.6 GSM250895 Tc_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
14.6 99.5 GSM298067 Leaf tissue of Paragon at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
13.3 99.5 GSM250899 TcLr34_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
11.3 99.3 GSM298092 Crown tissue of Solstice at 3 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
6.7 98.4 GSM250896 Tc_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.2 98.1 GSM250900 TcLr34_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.8 97.9 GSM138145 Genotype RL4452 developing seed at 5 days after anthesis, biological rep3 location SB GSE5937 Wheat expression level polymorphism study parental genotypes 2 biological reps from SB location
5.1 97.5 GSM250898 TcLr1_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.8 97.2 GSM111190 genotype G32 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.37 2e-64 246 Ta.449.1.S1_at CD908263 - - 2e-3 At1g01470 LEA14 (LATE EMBRYOGENESIS ABUNDANT 14) C.G. S.X.
0.07 2e-15 83 Ta.25026.1.S1_at BQ804965 - - 5e-1 At3g02480 ABA-responsive protein-related C.G. S.X.
0.03 9e-2 38 TaAffx.105586.1.S1_s_at BJ317378 - - 3e-2 At3g49430 SRp34a (Ser/Arg-rich protein 34a) C.G. S.X.
0.03 9e-2 38 TaAffx.105586.1.S1_at BJ317378 - - 3e-2 At3g49430 SRp34a (Ser/Arg-rich protein 34a) C.G. S.X.
0.01 3e-1 36 Ta.22899.1.S1_at CK212881 - - 4e+0 At5g55750 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.03 1e+0 34 TaAffx.30748.1.S1_at CA622441 - - 4e+0 At3g29010 catalytic C.G. S.X.
0.04 1e+0 34 TaAffx.106526.1.S1_at CA716852 - - 2e+0 At2g01080 - C.G. S.X.
0.01 1e+0 34 Ta.253.1.S1_at AF123608.1 - - 1e-12 At2g30490 C4H (CINNAMATE-4-HYDROXYLASE) C.G. S.X.
0.02 5e+0 32 TaAffx.91777.1.S1_at BQ239662 - - 1e-17 At4g05420 DDB1A (DAMAGED DNA BINDING PROTEIN 1A) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 1e+0 34 Arabidopsis thaliana At1g01470 837071 LEA14 (LATE EMBRYOGENESIS ABUNDANT 14) Encodes late-embryogenesis abundant protein whose mRNA levels are induced in response to wounding and light stress. Might be involved in protection against dessication. - - - C.G. S.X.
0.04 1e-1 38 Glycine max PsAffx.C209000025_at PsAffx.C209000025 - - 8e-1 At4g17490 ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6) C.G. S.X.
0.47 8e-59 226 Hordeum vulgare Contig3842_s_at Contig3842 - - 1e-3 At1g01470 LEA14 (LATE EMBRYOGENESIS ABUNDANT 14) C.G. S.X.
0.69 0 1203 Oryza sativa Os05g0584200 AK061818.1 - Late embryogenesis abundant protein Lea14-A 4e-2 At1g01470 LEA14 (LATE EMBRYOGENESIS ABUNDANT 14) C.G. S.X.
0.03 7e+0 32 Populus trichocarpa PtpAffx.222546.1.S1_s_at pmrna40057 nbs-lrr resistance protein /// NBS resistance protein - 2e+0 At5g35450 disease resistance protein (CC-NBS-LRR class), putative C.G. S.X.
0.04 2e-3 42 Vitis vinifera 1621530_at CF403816 hypothetical protein LOC100241458 - 3e-1 At2g46140 late embryogenesis abundant protein, putative / LEA protein, putative C.G. S.X.
0.45 5e-94 343 Zea mays Zm.2020.1.A1_at AY105938.1 hypothetical protein LOC100274480 - 1e-4 At1g01470 LEA14 (LATE EMBRYOGENESIS ABUNDANT 14) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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