CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.15513.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.96 99.3 Ta.15513.1.S1_at CA485206 - - 3e+0 At4g31700 RPS6 (RIBOSOMAL PROTEIN S6) S.X. H.G.
0.51 73.0 Ta.5258.1.S1_at CK207008 - - 2e-3 At2g35780 scpl26 (serine carboxypeptidase-like 26) S.X. H.G.
0.46 66.8 TaAffx.54497.1.S1_at CA680765 - - 4e+0 At4g09460 ATMYB6 S.X. H.G.
0.41 59.6 TaAffx.57555.1.S1_at CA618738 - - 2e+1 At5g67600 unknown protein S.X. H.G.
0.41 59.6 TaAffx.85723.1.S1_at CA620198 - - 1e+0 At4g13950 RALFL31 (ralf-like 31) S.X. H.G.
0.33 46.9 TaAffx.129082.2.S1_at CA610797 - - 4e-3 At1g58280 - S.X. H.G.
0.32 44.4 TaAffx.120295.1.S1_at BJ232977 - - 2e+1 At5g42504 unknown protein S.X. H.G.
0.32 44.4 TaAffx.84919.1.S1_at CA627238 - - 2e+1 At5g39920 - S.X. H.G.
0.32 44.4 TaAffx.25126.1.S1_at CA705922 - - 3e+0 At3g17460 PHD finger family protein S.X. H.G.
0.31 42.7 Ta.2138.2.S1_at CA632124 - - 1e+0 At1g55840 SEC14 cytosolic factor (SEC14) / phosphoglyceride transfer protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
18.7 99.7 GSM298070 Leaf tissue of Paragon at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
9.3 99.0 GSM298067 Leaf tissue of Paragon at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
8.1 98.8 GSM298092 Crown tissue of Solstice at 3 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
7.8 98.7 GSM250895 Tc_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.3 98.6 GSM111233 genotype H8 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
7.1 98.5 GSM250898 TcLr1_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.0 98.5 GSM250899 TcLr34_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.1 98.1 GSM250900 TcLr34_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.7 97.9 GSM250896 Tc_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.1 97.5 GSM298093 Crown tissue of Solstice at 5 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 2e-1 36 TaAffx.29368.1.S1_at CA644222 - - 4e+0 At5g26170 WRKY50 C.G. S.X.
0.03 2e-1 36 Ta.28255.1.A1_at CA680800 - - 3e-2 At4g25990 CIL C.G. S.X.
0.04 8e-1 34 TaAffx.112087.1.S1_at CA627192 - - 2e+1 At5g49370 - C.G. S.X.
0.02 8e-1 34 Ta.12387.2.S1_s_at CD874108 - - 9e-1 At4g25990 CIL C.G. S.X.
0.05 8e-1 34 Ta.12387.1.A1_at CA618208 - - 3e-1 At4g25990 CIL C.G. S.X.
0.06 8e-1 34 Ta.12387.3.S1_at CA618283 - - 3e-1 At4g25990 CIL C.G. S.X.
0.05 8e-1 34 Ta.12387.1.A1_x_at CA618208 - - 3e-1 At4g25990 CIL C.G. S.X.
0.02 8e-1 34 Ta.12387.2.S1_x_at CD874108 - - 9e-1 At4g25990 CIL C.G. S.X.
0.04 3e+0 32 TaAffx.108154.1.S1_at CA691163 - - 1e+0 At3g01020 ISU2 (ISCU-LIKE 2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e+0 32 Arabidopsis thaliana At4g31700 829298 RPS6 (RIBOSOMAL PROTEIN S6) Encodes a putative ribosomal protein S6 (rps6). - - - C.G. S.X.
0.05 7e-5 48 Glycine max Gma.17638.1.S1_at BG510363 - - 3e-9 At5g57180 CIA2 (CHLOROPLAST IMPORT APPARATUS 2) C.G. S.X.
0.26 2e-49 194 Hordeum vulgare Contig11985_at Contig11985 - - 3e-2 At5g18310 unknown protein C.G. S.X.
0.66 9e-144 510 Oryza sativa Os02g0148000 AK120401.1 - Zinc finger protein 1e+0 At4g27810 unknown protein C.G. S.X.
0.05 3e-1 36 Populus trichocarpa PtpAffx.217166.1.S1_x_at pmrna32318 hypothetical protein - 9e-1 At5g47130 Bax inhibitor-1 family / BI-1 family C.G. S.X.
0.04 3e+0 30 Vitis vinifera 1621223_at CF206465.1 - - 8e-1 At4g31700 RPS6 (RIBOSOMAL PROTEIN S6) C.G. S.X.
0.34 7e-27 119 Zea mays Zm.15248.1.A1_at BM074646 - - 1e+0 At5g52420 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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