Gene omics information

Query gene ID	Ta.14513.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	88.0	Ta.14513.1.S1_at	CA498740	-	-	2e-4	At1g12710	AtPP2-A12 (Phloem protein 2-A12)	S.X.	H.G.	Please select
0.71	88.0	Ta.14513.1.S1_a_at	CA498740	-	-	2e-4	At1g12710	AtPP2-A12 (Phloem protein 2-A12)	S.X.	H.G.	Please select
0.50	72.4	TaAffx.114664.3.S1_s_at	CA735933	-	-	6e-4	At1g77855	unknown protein	S.X.	H.G.	Please select
0.50	72.4	TaAffx.114664.2.A1_at	BJ274528	-	-	1e+0	At2g21740	unknown protein	S.X.	H.G.	Please select
0.50	72.4	Ta.15094.1.S1_x_at	CA689877	-	-	9e-1	At1g63090	AtPP2-A11 (Phloem protein 2-A11)	S.X.	H.G.	Please select
0.44	64.5	TaAffx.38522.1.A1_at	BJ221646	-	-	3e-1	At2g01200	IAA32 (INDOLE-3-ACETIC ACID INDUCIBLE 32)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
11.3	99.3	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
10.6	99.2	GSM138188	genotype F38a developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
8.1	98.8	GSM138149	genotype F29 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
8.1	98.8	GSM138154	genotype H5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
7.2	98.5	GSM138184	genotype C25 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.8	98.4	GSM138200	genotype F48 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.0	98.0	GSM138178	genotype A88 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.7	97.9	GSM138162	genotype E5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.5	97.8	GSM138215	genotype A77 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.4	97.7	GSM138161	genotype A91 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.97	0	2266	Ta.14513.1.S1_a_at	CA498740	-	-	2e-4	At1g12710	AtPP2-A12 (Phloem protein 2-A12)	C.G.	S.X.	Please select
0.27	3e-80	299	Ta.14513.2.S1_at	CA611701	-	-	3e-3	At1g63090	AtPP2-A11 (Phloem protein 2-A11)	C.G.	S.X.	Please select
0.31	3e-68	260	Ta.15094.1.S1_x_at	CA689877	-	-	9e-1	At1g63090	AtPP2-A11 (Phloem protein 2-A11)	C.G.	S.X.	Please select
0.07	6e-20	99	TaAffx.81523.1.S1_at	CA684969	-	-	2e+1	At5g57625	allergen V5/Tpx-1-related family protein	C.G.	S.X.	Please select
0.02	2e-1	38	Ta.7899.1.A1_at	CK163750	-	-	5e+0	At4g29350	PFN2 (PROFILIN 2)	C.G.	S.X.	Please select
0.02	8e-1	36	Ta.25081.1.A1_at	BQ162133	-	-	4e+0	At5g55570	unknown protein	C.G.	S.X.	Please select
0.02	8e-1	36	Ta.23045.1.S1_x_at	CA604143	-	-	8e-3	At1g23710	unknown protein	C.G.	S.X.	Please select
0.02	8e-1	36	Ta.23045.3.S1_at	CA629449	-	-	4e-1	At3g09032	unknown protein	C.G.	S.X.	Please select
0.02	8e-1	36	Ta.23045.2.S1_x_at	CA597036	-	-	1e+0	At3g09310	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	2e-4	48	Arabidopsis thaliana	At1g12710	837826	AtPP2-A12 (Phloem protein 2-A12)	This gene is predicted to encode a protein with a PP2 domain. This domain in present in lectins found in squash and cucumber, suggesting that this protein could potentially have carbohydrate binding capabilities.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	3e-7	57	Glycine max	GmaAffx.87597.2.S1_at	BM891425	-	-	1e+0	At4g04580	myb family transcription factor	C.G.	S.X.	Please select
0.83	0	1338	Hordeum vulgare	Contig7427_at	Contig7427	-	-	7e-1	At3g53000	AtPP2-A15 (Phloem protein 2-A15)	C.G.	S.X.	Please select
0.41	2e-89	331	Oryza sativa	Os.3246.2.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	4e-3	44	Populus trichocarpa	PtpAffx.6218.2.S1_at	BI071208	f-box family protein	-	3e-8	At1g12710	AtPP2-A12 (Phloem protein 2-A12)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	3e-3	42	Vitis vinifera	1621526_at	CF211422	hypothetical protein LOC100241013	-	1e-5	At3g61060	AtPP2-A13 (Arabidopsis thaliana phloem protein 2-A13)	C.G.	S.X.	Please select
0.39	3e-38	159	Zea mays	Zm.2366.1.A1_at	BG873911	ATPP2-A13	-	1e-5	At1g12710	AtPP2-A12 (Phloem protein 2-A12)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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