Gene omics information

Query gene ID	Ta.14320.1.A1_at
Gene name	WRKY16 transcription factor
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.38	54.7	Ta.14320.1.A1_at	BU100245	WRKY16 transcription factor	-	4e-8	At5g28650	WRKY74	S.X.	H.G.	Please select
0.67	86.3	Ta.5407.2.S1_at	CA735601	-	-	2e+0	At3g62020	GLP10 (GERMIN-LIKE PROTEIN 10)	S.X.	H.G.	Please select
0.67	86.3	Ta.5407.2.S1_x_at	CA735601	-	-	2e+0	At3g62020	GLP10 (GERMIN-LIKE PROTEIN 10)	S.X.	H.G.	Please select
0.47	67.9	Ta.5407.1.S1_x_at	CN012562	-	-	1e-7	At1g77370	glutaredoxin, putative	S.X.	H.G.	Please select
0.46	66.8	Ta.22534.2.S1_at	CA697218	-	-	6e-3	At1g50740	unknown protein	S.X.	H.G.	Please select
0.37	53.0	Ta.6052.2.S1_a_at	CA661259	-	-	3e-8	At3g27740	CARA (CARBAMOYL PHOSPHATE SYNTHETASE A)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.8	97.9	GSM298081	Leaf tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.7	97.9	GSM298082	Leaf tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.1	97.5	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
4.9	97.3	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM143502	Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.3	96.7	GSM143504	Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.8	96.0	GSM314264	tissue type: seedling, crown - rep2	GSE12508	Transcription patterns during wheat development
3.6	95.6	GSM143517	Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.5	95.4	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
3.4	95.2	GSM143519	Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.50	0	785	Ta.14320.2.S1_at	CA680676	-	-	4e+0	At4g25280	adenylate kinase family protein	C.G.	S.X.	Please select
0.43	1e-134	480	TaAffx.86717.1.S1_at	CA602133	WRKY16 transcription factor	-	7e-2	At3g04670	WRKY39	C.G.	S.X.	Please select
0.05	1e-8	61	TaAffx.89714.1.S1_x_at	AL821214	-	-	4e-1	At2g06530	VPS2.1	C.G.	S.X.	Please select
0.01	6e-1	36	Ta.4725.1.S1_at	CK195830	WRKY transcription factor	-	3e-7	At5g07100	WRKY26	C.G.	S.X.	Please select
0.02	3e+0	34	TaAffx.8973.1.S1_at	CA617114	WRKY30 transcription factor	-	7e-5	At4g23550	WRKY29	C.G.	S.X.	Please select
0.02	3e+0	34	TaAffx.64818.1.S1_at	BJ274245	WRKY25 transcription factor	-	2e+0	At2g11005	glycine-rich protein	C.G.	S.X.	Please select
0.04	3e+0	34	TaAffx.107625.1.S1_at	CA697293	-	-	4e+0	At4g24240	WRKY7	C.G.	S.X.	Please select
0.03	3e+0	34	Ta.25475.1.S1_x_at	BT009449.1	-	-	2e-7	At4g31550	WRKY11	C.G.	S.X.	Please select
0.02	1e+1	32	TaAffx.81766.1.S1_at	CA682187	-	-	3e-1	At2g46290	eukaryotic translation initiation factor 3 subunit 2, putative / eIF-3 beta, putative / eIF3i, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.11	4e-8	59	Arabidopsis thaliana	At5g28650	832971	WRKY74	member of WRKY Transcription Factor; Group II-d	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	8e-1	36	Glycine max	GmaAffx.52704.3.S1_at	AW423584	WRKY29 protein	-	1e-2	At2g37260	TTG2 (TRANSPARENT TESTA GLABRA 2)	C.G.	S.X.	Please select
0.17	3e-29	129	Hordeum vulgare	Contig23011_at	Contig23011	-	-	3e-26	At5g28650	WRKY74	C.G.	S.X.	Please select
0.19	1e-28	129	Oryza sativa	Os12g0597700	AK070648.1	-	Probable WRKY transcription factor 15 (WRKYDNA-binding protein 15)	4e-28	At5g28650	WRKY74	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.11	2e-4	48	Populus trichocarpa	PtpAffx.37459.1.S1_at	CK090406	hypothetical protein	-	3e-59	At2g30590	WRKY21	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.06	7e-4	44	Vitis vinifera	1619424_at	BQ800205	hypothetical protein LOC100267695	-	5e-9	At4g23550	WRKY29	C.G.	S.X.	Please select
0.25	7e-48	190	Zea mays	Zm.9098.1.A1_a_at	BM336161	Hypothetical protein LOC100192894	-	6e-6	At4g31550	WRKY11	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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