CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.13841.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 74.9 Ta.13841.1.S1_at AJ440511 - - 6e-5 At3g14680 CYP72A14 S.X. H.G.
0.55 76.8 Ta.8859.1.S1_at BQ162524 - - 2e-1 At4g39950 CYP79B2 S.X. H.G.
0.50 72.4 TaAffx.59343.1.S1_at CA602787 - - 4e+0 At2g23840 HNH endonuclease domain-containing protein S.X. H.G.
0.36 51.9 Ta.25113.1.S1_at CA603697 - - 1e+1 At3g12880 invertase/pectin methylesterase inhibitor family protein S.X. H.G.
0.25 32.1 Ta.5322.1.S1_at BJ285768 - - 9e-3 At1g80120 unknown protein S.X. H.G.
0.23 29.0 TaAffx.3210.1.S1_at BQ236874 - - 4e-2 At3g07700 ABC1 family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.1 99.3 GSM250900 TcLr34_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
10.8 99.2 GSM143506 Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
10.5 99.2 GSM143507 Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
9.1 99.0 GSM143518 Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
8.4 98.9 GSM143509 Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
8.4 98.9 GSM143505 Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
8.4 98.9 GSM250896 Tc_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.8 98.7 GSM143515 Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.4 98.6 GSM143517 Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.3 98.6 GSM143512 Thatcher_Lr34 (resistant), mock inoculated distal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.66 0 1170 Ta.5901.1.S1_x_at CD903423 - - 3e-1 At3g14650 CYP72A11 C.G. S.X.
0.41 0 724 TaAffx.78376.1.S1_at CA733223 - - 3e-1 At3g14650 CYP72A11 C.G. S.X.
0.36 4e-145 515 Ta.5901.3.S1_x_at CA609571 - - 4e+0 At5g21010 ATBPM5 (BTB-POZ and MATH domain 5) C.G. S.X.
0.24 4e-145 515 Ta.13841.3.S1_at CA693945 - - 2e-5 At3g14680 CYP72A14 C.G. S.X.
0.24 4e-145 515 Ta.13841.3.S1_x_at CA693945 - - 2e-5 At3g14680 CYP72A14 C.G. S.X.
0.19 5e-61 236 Ta.5901.2.S1_at CA670711 - - 5e+0 At3g15900 unknown protein C.G. S.X.
0.19 5e-61 236 Ta.5901.2.S1_x_at CA670711 - - 5e+0 At3g15900 unknown protein C.G. S.X.
0.16 5e-52 206 Ta.13841.2.A1_at CA639514 - - 4e+0 At2g18876 unknown protein C.G. S.X.
0.07 7e-8 59 TaAffx.112218.1.S1_at CA622662 - - 7e-1 At3g23260 F-box family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 6e-5 50 Arabidopsis thaliana At3g14680 820696 CYP72A14 putative cytochrome P450 - - - C.G. S.X.
0.09 9e-8 59 Glycine max Gma.7159.1.A1_at BU545176 - - 1e+0 At3g14690 CYP72A15 C.G. S.X.
0.80 0 1390 Hordeum vulgare Contig3160_at Contig3160 - - 1e-5 At3g14650 CYP72A11 C.G. S.X.
0.41 1e-44 182 Oryza sativa Os05g0372300 AK120018.1 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 1e-3 At3g14630 CYP72A9 C.G. S.X.
0.03 5e-3 44 Populus trichocarpa PtpAffx.222860.1.S1_s_at pmrna40550 cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// hypothetical protein - 8e-4 At3g15460 brix domain-containing protein C.G. S.X.
0.03 3e-4 46 Vitis vinifera 1617087_at CF202027.1 hypothetical protein LOC100245388 - 5e+0 At5g45550 mob1/phocein family protein C.G. S.X.
0.46 2e-98 359 Zea mays Zm.9289.1.A1_at BM267824 - - 1e-6 At3g14680 CYP72A14 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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