CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.1382.3.S1_a_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.64 83.6 Ta.1382.3.S1_a_at CA637786 - - 3e-10 At4g27720 - S.X. H.G.
0.61 82.0 Ta.1382.1.S1_x_at BQ237866 - - 8e-23 At1g64650 - S.X. H.G.
0.50 72.4 Ta.28368.1.S1_x_at CK206492 Type 1 non-specific lipid transfer protein precursor - 8e+0 At5g63087 - S.X. H.G.
0.20 24.0 Ta.8906.1.A1_at BQ162610 - - 6e-3 At1g56670 GDSL-motif lipase/hydrolase family protein S.X. H.G.
0.16 18.2 Ta.28368.2.S1_at CB307729 Type 1 non specific lipid transfer protein precursor - 2e+0 At4g22250 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.14 15.8 Ta.9344.1.S1_at CD917189 - - 1e-12 At1g27440 GUT2 S.X. H.G.
0.13 14.6 Ta.23696.2.S1_a_at BJ216741 - - 7e-2 At1g77630 peptidoglycan-binding LysM domain-containing protein S.X. H.G.
0.12 13.3 Ta.28715.1.S1_at CD930968 - - 2e-36 At5g35160 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.1 98.5 GSM314282 tissue type: 3-5 DAP caryopsis - rep2 GSE12508 Transcription patterns during wheat development
7.0 98.5 GSM314281 tissue type: 3-5 DAP caryopsis - rep1 GSE12508 Transcription patterns during wheat development
6.9 98.4 GSM314283 tissue type: 3-5 DAP caryopsis - rep3 GSE12508 Transcription patterns during wheat development
4.7 97.1 GSM138194 genotype J15 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.6 97.0 GSM138211 genotype B65 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.1 96.4 GSM138213 genotype C10 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.0 96.3 GSM138168 genotype B68 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.8 96.0 GSM111237 genotype F38b developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
3.7 95.8 GSM111193 genotype F38a developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
3.6 95.6 GSM138200 genotype F48 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.24 3e-140 498 Ta.1382.1.S1_x_at BQ237866 - - 8e-23 At1g64650 - C.G. S.X.
0.13 2e-36 153 Ta.6961.1.S1_at CA666763 - - 4e-34 At1g64650 - C.G. S.X.
0.03 3e-1 36 TaAffx.64227.1.A1_at BJ309641 - - 1e+0 At3g19340 - C.G. S.X.
0.03 1e+0 34 Ta.9396.3.S1_at CA641406 - - 4e+0 At2g23430 ICK1 C.G. S.X.
0.02 1e+0 34 Ta.15664.1.S1_at CA486187 - - 1e-7 At3g61830 ARF18 (AUXIN RESPONSE FACTOR 18) C.G. S.X.
0.02 5e+0 32 Ta.3068.1.S1_at BJ297121 - - 3e+0 At3g17790 PAP17 C.G. S.X.
0.02 5e+0 32 Ta.30780.1.A1_at BQ171096 - - 6e+0 At3g13403 - C.G. S.X.
0.04 2e+1 30 TaAffx.66606.1.A1_at BG909021 Plasma membrane intrinsic protein - 4e-1 At3g05155 sugar transporter, putative C.G. S.X.
0.03 2e+1 30 TaAffx.64614.1.A1_at BJ286132 - - 1e+0 At3g55820 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 3e-10 65 Arabidopsis thaliana At4g27720 828886 - F:unknown;P:unknown;C:plasma membrane;BPMOFA - - - C.G. S.X.
0.19 7e-40 165 Glycine max Gma.7433.1.S1_at BM093327 - - 5e-32 At1g64650 - C.G. S.X.
0.24 7e-130 462 Hordeum vulgare Contig6578_at Contig6578 - - 1e-27 At1g64650 - C.G. S.X.
0.22 1e-85 317 Oryza sativa Os03g0114800 AK065394.1 - Protein of unknown function DUF791 family protein 1e-33 At1g64650 - C.G. S.X.
0.27 2e-30 133 Populus trichocarpa PtpAffx.5661.4.A1_a_at BU874770 hypothetical protein - 4e-22 At1g64650 - C.G. S.X.
0.18 2e-24 111 Vitis vinifera 1606868_at CF214473 hypothetical protein LOC100267516 - 1e-44 At4g27720 - C.G. S.X.
0.33 3e-55 214 Zea mays Zm.2962.1.S1_at CF045165 hypothetical protein LOC100272424 - 7e-18 At4g27720 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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