CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.1382.1.S1_x_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.41 59.6 Ta.1382.1.S1_x_at BQ237866 - - 8e-23 At1g64650 - S.X. H.G.
0.44 64.5 Ta.28368.2.S1_at CB307729 Type 1 non specific lipid transfer protein precursor - 2e+0 At4g22250 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.43 62.2 Ta.1227.1.A1_at BQ160869 - - 2e+1 At1g47780 acyl-protein thioesterase-related S.X. H.G.
0.40 58.4 Ta.28368.1.S1_x_at CK206492 Type 1 non-specific lipid transfer protein precursor - 8e+0 At5g63087 - S.X. H.G.
0.40 58.4 Ta.3199.1.S1_a_at BJ207484 - - 5e+0 At5g21940 unknown protein S.X. H.G.
0.36 51.9 Ta.6416.1.S1_at CK154083 - - 5e-15 At2g38110 GPAT6 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 6) S.X. H.G.
0.32 44.4 Ta.12753.1.S1_at CD926424 - - 5e+0 At1g18130 tRNA synthetase-related / tRNA ligase-related S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.6 98.3 GSM314283 tissue type: 3-5 DAP caryopsis - rep3 GSE12508 Transcription patterns during wheat development
6.1 98.1 GSM314281 tissue type: 3-5 DAP caryopsis - rep1 GSE12508 Transcription patterns during wheat development
6.1 98.1 GSM314282 tissue type: 3-5 DAP caryopsis - rep2 GSE12508 Transcription patterns during wheat development
4.9 97.3 GSM138211 genotype B65 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.7 95.8 GSM111145 genotype RL4452 developing seed at 5 days after anthesis, biological rep1 GSE4929 wheat expression level polymorphism study parental genotypes 2 biological reps
3.6 95.6 GSM111227 genotype F48 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
3.5 95.4 GSM111237 genotype F38b developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
3.5 95.4 GSM111193 genotype F38a developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
3.4 95.2 GSM111181 genotype C31 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
3.4 95.2 GSM111228 genotype B65 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.41 0 896 Ta.1382.2.S1_x_at CA633853 - - 3e-8 At1g64650 - C.G. S.X.
0.41 0 896 Ta.1382.2.S1_at CA633853 - - 3e-8 At1g64650 - C.G. S.X.
0.51 0 642 Ta.6961.1.S1_at CA666763 - - 4e-34 At1g64650 - C.G. S.X.
0.24 9e-140 498 Ta.1382.3.S1_a_at CA637786 - - 3e-10 At4g27720 - C.G. S.X.
0.15 4e-68 260 TaAffx.4970.1.S1_at CA727403 - - 4e-6 At1g64650 - C.G. S.X.
0.12 1e-55 218 Ta.6961.2.A1_at CA740796 - - 5e-6 At1g64650 - C.G. S.X.
0.04 3e-4 48 Ta.26913.2.S1_x_at BQ605894 - - 4e-2 At5g40730 AGP24 C.G. S.X.
0.02 7e-2 40 TaAffx.11359.1.S1_at CA702758 - - 1e+0 At4g39260 GR-RBP8 C.G. S.X.
0.01 3e-1 38 TaAffx.111359.1.S1_at CA653012 - - 1e+0 At5g46750 AGD9 (ARF-GAP DOMAIN 9) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.32 8e-23 109 Arabidopsis thaliana At1g64650 842773 - F:unknown;P:unknown;C:plasma membrane;BPMOFA - - - C.G. S.X.
0.10 1e-40 169 Glycine max Gma.7433.1.S1_at BM093327 - - 5e-32 At1g64650 - C.G. S.X.
0.73 0 1877 Hordeum vulgare Contig6578_at Contig6578 - - 1e-27 At1g64650 - C.G. S.X.
0.56 0 1134 Oryza sativa Os03g0114800 AK065394.1 - Protein of unknown function DUF791 family protein 1e-33 At1g64650 - C.G. S.X.
0.18 1e-22 109 Populus trichocarpa PtpAffx.5661.2.S1_s_at CV228504 hypothetical protein - 6e-113 At4g27720 - C.G. S.X.
0.12 3e-32 139 Vitis vinifera 1606868_at CF214473 hypothetical protein LOC100267516 - 1e-44 At4g27720 - C.G. S.X.
0.18 1e-65 250 Zea mays Zm.2962.1.S1_at CF045165 hypothetical protein LOC100272424 - 7e-18 At4g27720 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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