Gene omics information

Query gene ID	Ta.13610.2.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.43	62.2	Ta.13610.2.S1_at	BJ223726	-	-	1e-2	At2g40970	myb family transcription factor	S.X.	H.G.	Please select
0.47	67.9	Ta.7685.2.S1_at	BJ317106	-	-	1e+0	At1g55230	unknown protein	S.X.	H.G.	Please select
0.35	49.8	Ta.2986.2.S1_a_at	BJ283168	-	-	1e-1	At4g19350	EMB3006 (embryo defective 3006)	S.X.	H.G.	Please select
0.33	46.9	TaAffx.114853.1.S1_at	BJ291348	-	-	6e-1	At3g06860	MFP2 (MULTIFUNCTIONAL PROTEIN 2)	S.X.	H.G.	Please select
0.33	46.9	TaAffx.23906.1.S1_at	CA728504	-	-	2e-5	At2g20190	CLASP (CLIP-ASSOCIATED PROTEIN)	S.X.	H.G.	Please select
0.19	22.4	TaAffx.86836.1.S1_at	CA599908	-	-	8e+0	At4g36910	LEJ2 (LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2)	S.X.	H.G.	Please select
0.13	14.6	Ta.2949.3.S1_at	BJ314614	-	-	5e-9	At1g48410	AGO1 (ARGONAUTE 1)	S.X.	H.G.	Please select
0.11	12.4	Ta.24136.3.S1_at	BJ315560	-	-	8e-3	At2g34070	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
13.3	99.5	GSM298085	Crown tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
11.9	99.4	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
11.6	99.3	GSM298087	Crown tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
11.6	99.3	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
11.3	99.3	GSM298084	Crown tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
10.9	99.3	GSM298083	Crown tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
9.2	99.0	GSM298086	Crown tissue of Solstice at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
8.5	98.9	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
8.2	98.8	GSM298088	Crown tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
7.9	98.7	GSM111185	genotype C22 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	2e-1	36	TaAffx.83456.1.S1_at	CA657458	-	-	9e-1	At4g09030	AGP10 (ARABINOGALACTAN PROTEIN 10)	C.G.	S.X.	Please select
0.03	7e-1	34	TaAffx.14213.1.S1_at	BJ275222	-	-	8e-6	At1g23110	unknown protein	C.G.	S.X.	Please select
0.01	7e-1	34	Ta.684.1.S1_at	M90664.1	-	-	3e-24	At5g06460	ATUBA2	C.G.	S.X.	Please select
0.04	3e+0	32	TaAffx.9110.1.S1_at	CA612098	-	-	4e+0	At1g55615	unknown protein	C.G.	S.X.	Please select
0.04	3e+0	32	TaAffx.30449.1.S1_at	CA625197	-	-	9e-1	At4g11385	unknown protein	C.G.	S.X.	Please select
0.04	3e+0	32	TaAffx.25958.1.S1_at	CA693828	-	-	1e+0	At4g09030	AGP10 (ARABINOGALACTAN PROTEIN 10)	C.G.	S.X.	Please select
0.04	3e+0	32	TaAffx.129139.4.A1_at	CA665900	-	-	4e+0	At1g60920	agl55 (AGAMOUS-LIKE 55)	C.G.	S.X.	Please select
0.03	3e+0	32	Ta.9156.2.A1_a_at	CD870512	aspartic proteinase	-	1e-1	At1g11910	aspartyl protease family protein	C.G.	S.X.	Please select
0.03	3e+0	32	Ta.6420.2.S1_a_at	CA502407	-	-	1e-16	At2g43020	ATPAO2 (Polyamine oxidase 2)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e-2	40	Arabidopsis thaliana	At2g40970	818697	myb family transcription factor	F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;PO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	6e-2	38	Glycine max	GmaAffx.86567.1.S1_at	BM520821	-	-	1e-12	At5g12480	CPK7 (calmodulin-domain protein kinase 7)	C.G.	S.X.	Please select
0.03	5e+0	30	Hordeum vulgare	Contig17881_at	Contig17881	-	-	4e-1	At4g17580	Bax inhibitor-1 family protein / BI-1 family protein	C.G.	S.X.	Please select
0.04	8e-2	38	Oryza sativa	Os12g0103200	9640.m00025	-	-	4e-1	At3g24750	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	4e-3	42	Populus trichocarpa	PtpAffx.212237.1.S1_x_at	pmrna23990	hypothetical protein	-	2e+1	At5g19230	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	7e-1	32	Vitis vinifera	1621876_at	BQ798834	hypothetical protein LOC100253321	-	7e-2	At5g50540	unknown protein	C.G.	S.X.	Please select
0.04	4e+0	30	Zea mays	ZmAffx.736.1.A1_at	AI665573	-	-	2e-1	At1g36390	co-chaperone grpE family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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