Gene omics information

Query gene ID	Ta.13447.1.S1_at
Gene name	GSK-like kinase
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.77	90.8	Ta.13447.1.S1_at	AF525086.1	GSK-like kinase	-	2e-45	At5g26751	ATSK11	S.X.	H.G.	Please select
0.80	92.2	Ta.6516.1.S1_at	CD888604	-	-	1e-2	At5g59210	myosin heavy chain-related	S.X.	H.G.	Please select
0.67	86.3	Ta.16587.1.A1_at	BJ308493	-	-	1e+0	At1g26210	unknown protein	S.X.	H.G.	Please select
0.55	76.8	TaAffx.123433.1.S1_at	CA650258	-	-	5e+0	At4g21610	LOL2 (LSD ONE LIKE 2)	S.X.	H.G.	Please select
0.50	72.4	Ta.23363.1.S1_a_at	CA747290	-	-	2e+0	At2g35070	unknown protein	S.X.	H.G.	Please select
0.27	35.6	Ta.12527.1.S1_s_at	CK154358	-	-	1e-7	At4g38730	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
40.3	99.9	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
38.1	99.9	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
32.7	99.9	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
21.0	99.7	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
19.1	99.7	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
15.0	99.6	GSM139933	Anther mature anthers rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.6	92.9	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
2.5	92.5	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
2.2	91.0	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
2.2	91.0	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.33	1e-110	400	Ta.20401.1.S1_at	BJ261212	Shaggy-like kinase	-	3e-35	At5g14640	SK13 (SHAGGY-LIKE KINASE 13)	C.G.	S.X.	Please select
0.30	2e-41	171	Ta.3003.1.S1_x_at	BE398996	-	-	3e-44	At5g26751	ATSK11	C.G.	S.X.	Please select
0.30	2e-41	171	Ta.3003.1.S1_s_at	BE398996	-	-	3e-44	At5g26751	ATSK11	C.G.	S.X.	Please select
0.04	7e-17	89	TaAffx.23391.1.S1_at	CA735679	-	-	5e-2	At4g19680	IRT2	C.G.	S.X.	Please select
0.09	7e-14	79	TaAffx.53045.1.S1_at	CA697232	-	-	3e-29	At3g05840	ATSK12	C.G.	S.X.	Please select
0.08	1e-9	65	Ta.9422.2.S1_a_at	CA646771	-	-	5e-29	At1g06390	GSK1 (GSK3/SHAGGY-LIKE PROTEIN KINASE 1)	C.G.	S.X.	Please select
0.07	7e-8	59	Ta.24581.1.A1_x_at	BJ220400	-	-	3e-4	At4g00720	ATSK32 (SHAGGY-LIKE PROTEIN KINASE 32)	C.G.	S.X.	Please select
0.02	4e-3	44	TaAffx.91475.1.S1_at	BJ316922	-	-	1e-1	At1g01530	AGL28 (AGAMOUS-LIKE 28)	C.G.	S.X.	Please select
0.09	1e-2	42	Ta.3019.1.S1_at	CK207806	-	-	3e-47	At1g06390	GSK1 (GSK3/SHAGGY-LIKE PROTEIN KINASE 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.35	2e-45	184	Arabidopsis thaliana	At5g26751	832733	ATSK11	encodes a SHAGGY-related kinase involved in meristem organization.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.33	6e-86	319	Glycine max	Gma.4193.1.S1_at	AW705861	-	-	3e-133	At5g26751	ATSK11	C.G.	S.X.	Please select
0.94	0	2763	Hordeum vulgare	Contig5449_at	Contig5449	-	-	2e-41	At3g05840	ATSK12	C.G.	S.X.	Please select
0.59	0	1300	Oryza sativa	Os05g0134000	AK121623.1	-	Shaggy-related protein kinase alpha (EC 2.7.1.-)(ASK-alpha)	4e-34	At3g05840	ATSK12	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.33	5e-68	260	Populus trichocarpa	PtpAffx.211690.1.S1_at	pmrna22917	hypothetical protein	-	6e-147	At5g26751	ATSK11	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.31	1e-43	176	Vitis vinifera	1621171_at	CF568972	-	-	2e-85	At5g14640	SK13 (SHAGGY-LIKE KINASE 13)	C.G.	S.X.	Please select
0.53	0	734	Zea mays	Zm.377.1.A1_at	AI714846	shaggy kinase homolog	-	2e-35	At5g26751	ATSK11	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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