Gene omics information

Query gene ID	Ta.13301.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.13301.1.S1_at	BQ483523	-	-	5e+0	At4g05497	F-box family protein	S.X.	H.G.	Please select
0.01	2.4	Ta.4578.1.S1_x_at	BJ268224	-	-	2e+0	At5g03170	FLA11	S.X.	H.G.	Please select
0.01	2.4	Ta.25248.1.A1_at	CD454523	-	-	2e+0	Atmg01090	-	S.X.	H.G.	Please select
0.00	0.7	Ta.4614.1.A1_at	BJ273705	-	-	3e-5	At4g12780	heat shock protein binding	S.X.	H.G.	Please select
0.00	0.7	TaAffx.1292.1.A1_at	CA701958	-	-	1e+0	At4g17010	unknown protein	S.X.	H.G.	Please select
0.00	0.7	TaAffx.38546.1.A1_at	BJ219894	-	-	1e+0	At2g35090	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
37.4	99.9	GSM111240	genotype F82 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
15.7	99.6	GSM111251	genotype A35 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
12.9	99.4	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
12.2	99.4	GSM324487	Si- B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
11.8	99.3	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
11.6	99.3	GSM111182	genotype A40 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
11.6	99.3	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
10.9	99.3	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
9.7	99.1	GSM138149	genotype F29 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
9.6	99.1	GSM139915	Anther pre-meiosis rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	4e-1	36	Ta.129.1.S1_at	U80037.1	ABA induced plasma membrane protein PM 19	-	2e-3	At1g04560	AWPM-19-like membrane family protein	C.G.	S.X.	Please select
0.03	1e+0	34	Ta.20848.1.S1_at	CA618586	-	-	1e-3	At3g07770	ATP binding	C.G.	S.X.	Please select
0.03	6e+0	32	TaAffx.42484.1.S1_at	AJ614871	-	-	5e-3	At1g47820	unknown protein	C.G.	S.X.	Please select
0.02	6e+0	32	TaAffx.37250.1.S1_at	BJ297079	-	-	1e-1	At3g25100	CDC45 (cell division cycle 45)	C.G.	S.X.	Please select
0.02	6e+0	32	Ta.6983.2.S1_x_at	CK205874	-	-	5e-1	At5g62500	ATEB1B (END BINDING PROTEIN 1B)	C.G.	S.X.	Please select
0.03	6e+0	32	Ta.12355.2.A1_at	BQ802065	-	-	2e-1	At2g42180	unknown protein	C.G.	S.X.	Please select
0.02	2e+1	30	TaAffx.98017.1.S1_at	BQ803183	-	-	1e+0	At3g42160	pectinesterase-related	C.G.	S.X.	Please select
0.03	2e+1	30	TaAffx.93099.1.S1_at	BJ232083	-	-	9e-1	At5g39470	F-box family protein	C.G.	S.X.	Please select
0.03	2e+1	30	TaAffx.8337.1.S1_at	CA627003	-	-	6e-1	At3g03500	tatD-related deoxyribonuclease family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	5e+0	32	Arabidopsis thaliana	At4g05497	830176	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;MPFO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	Gma.8247.1.S1_s_at	BG551390	-	-	3e+0	At5g62120	ARR23 (ARABIDOPSIS RESPONSE REGULATOR 23)	C.G.	S.X.	Please select
0.03	3e+0	32	Hordeum vulgare	HF13E24r_at	HF13E24r	-	-	9e-1	At1g11112	unknown protein	C.G.	S.X.	Please select
0.03	1e+1	32	Oryza sativa	Os11g0303100	9639.m01847	-	Herbicide safener binding protein	2e+0	At5g52740	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	8e+0	32	Populus trichocarpa	PtpAffx.33885.1.S1_at	DN497601	-	-	4e+0	At2g25344	LCR14 (Low-molecular-weight cysteine-rich 14)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	6e+0	30	Vitis vinifera	1622727_at	CB975534	hypothetical protein LOC100254910	-	1e+1	At5g20010	RAN-1	C.G.	S.X.	Please select
0.03	2e+0	32	Zea mays	ZmAffx.902.1.A1_at	AI770904	Hypothetical protein LOC100191467	-	3e+0	At4g16640	matrix metalloproteinase, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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