Gene omics information

Query gene ID	Ta.13282.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.53	74.9	Ta.13282.1.S1_at	CD373866	-	-	5e-8	At1g48650	helicase domain-containing protein	S.X.	H.G.	Please select
0.44	64.5	Ta.11079.2.S1_at	CA655580	-	-	4e+0	At3g59430	unknown protein	S.X.	H.G.	Please select
0.40	58.4	Ta.29633.1.S1_at	CK209176	-	-	1e-4	At3g17750	protein kinase family protein	S.X.	H.G.	Please select
0.37	53.0	Ta.24231.1.A1_at	BQ169137	-	-	5e+0	At5g38195	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	S.X.	H.G.	Please select
0.29	39.2	Ta.14271.1.S1_at	BQ838640	-	-	3e-34	At5g46210	CUL4 (CULLIN4)	S.X.	H.G.	Please select
0.28	39.2	Ta.5039.1.A1_a_at	BQ237298	-	-	6e+0	At4g30800	40S ribosomal protein S11 (RPS11B)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.1	94.5	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.0	94.3	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
2.9	94.0	GSM298087	Crown tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.7	93.3	GSM298085	Crown tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.6	92.9	GSM298059	Crown tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.5	92.5	GSM111212	genotype DH91 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.5	92.5	GSM111187	genotype B68 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.5	92.5	GSM298060	Crown tissue of Harnesk at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.5	92.5	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
2.4	92.0	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	7e-1	36	TaAffx.85428.1.S1_at	CA622833	-	-	4e+0	At5g42000	ORMDL family protein	C.G.	S.X.	Please select
0.02	7e-1	36	TaAffx.50900.1.S1_at	CA733592	-	-	1e+0	At5g42180	peroxidase 64 (PER64) (P64) (PRXR4)	C.G.	S.X.	Please select
0.02	7e-1	36	TaAffx.29428.1.S1_at	CA643062	-	-	9e-1	At1g80700	unknown protein	C.G.	S.X.	Please select
0.02	7e-1	36	Ta.6433.2.S1_at	BQ160765	-	-	8e+0	At3g52760	integral membrane Yip1 family protein	C.G.	S.X.	Please select
0.01	7e-1	36	Ta.425.2.S1_at	BJ250436	-	-	3e-6	At1g05010	EFE (ETHYLENE-FORMING ENZYME)	C.G.	S.X.	Please select
0.02	7e-1	36	Ta.28954.1.A1_at	CA744855	-	-	6e-7	At1g47270	AtTLP6 (TUBBY LIKE PROTEIN 6)	C.G.	S.X.	Please select
0.01	7e-1	36	Ta.18698.1.S1_at	CA640836	-	-	1e-5	At1g05010	EFE (ETHYLENE-FORMING ENZYME)	C.G.	S.X.	Please select
0.01	7e-1	36	Ta.11159.1.S1_at	BQ169527	-	-	2e-1	At5g54165	unknown protein	C.G.	S.X.	Please select
0.02	3e+0	34	TaAffx.8730.1.S1_at	CA620984	-	-	1e-6	At3g21770	peroxidase 30 (PER30) (P30) (PRXR9)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	5e-8	59	Arabidopsis thaliana	At1g48650	841287	helicase domain-containing protein	F:in 6 functions;P:unknown;C:intracellular;BMOFPVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	1e-2	42	Glycine max	Gma.10672.2.S1_s_at	AW349688	bZIP transcription factor bZIP41	-	2e-3	At3g62422	CPuORF3 (Conserved peptide upstream open reading frame 3)	C.G.	S.X.	Please select
0.82	0	1612	Hordeum vulgare	Contig11675_at	Contig11675	-	-	2e-10	At1g48650	helicase domain-containing protein	C.G.	S.X.	Please select
0.27	2e-163	577	Oryza sativa	Os01g0118100	CA765072	-	Helicase-associated region domain containingprotein	1e-41	At1g48650	helicase domain-containing protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	9e-1	36	Populus trichocarpa	PtpAffx.148854.1.S1_at	CK103545	hypothetical protein	-	3e-7	At4g21520	transducin family protein / WD-40 repeat family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	8e-1	34	Vitis vinifera	1621817_at	CB978007	-	-	1e+0	At4g39890	AtRABH1c (Arabidopsis Rab GTPase homolog H1c)	C.G.	S.X.	Please select
0.35	3e-69	262	Zea mays	Zm.15436.1.S1_at	CD437346	-	-	2e+0	At5g37750	heat shock protein binding / unfolded protein binding	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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