Gene omics information

Query gene ID	Ta.13274.2.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	92.2	Ta.13274.2.A1_at	CA613778	-	-	7e-2	At5g05360	unknown protein	S.X.	H.G.	Please select
0.88	94.4	TaAffx.15154.2.S1_s_at	CA744371	-	-	9e-1	At3g62030	peptidyl-prolyl cis-trans isomerase, chloroplast / cyclophilin / rotamase / cyclosporin A-binding protein (ROC4)	S.X.	H.G.	Please select
0.75	89.8	Ta.6692.2.A1_at	CA678021	-	-	1e-6	At4g36960	RNA recognition motif (RRM)-containing protein	S.X.	H.G.	Please select
0.74	89.4	TaAffx.78296.1.S1_at	CA734700	-	-	8e-1	At5g45700	NLI interacting factor (NIF) family protein	S.X.	H.G.	Please select
0.71	88.0	Ta.28190.2.S1_a_at	CA654134	-	-	7e-2	At5g07620	protein kinase family protein	S.X.	H.G.	Please select
0.67	86.3	Ta.11430.1.S1_at	CA637362	-	-	4e+0	At4g39860	unknown protein	S.X.	H.G.	Please select
0.67	86.3	TaAffx.8084.2.S1_at	CA742580	-	-	3e-2	At5g02480	-	S.X.	H.G.	Please select
0.54	75.5	Ta.3378.2.A1_at	CA666300	-	-	2e-1	At5g12390	FIS1B (FISSION 1B)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
37.5	99.9	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
19.6	99.7	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
19.6	99.7	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.5	99.1	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.5	98.6	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.3	98.2	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.0	98.0	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.8	97.9	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.3	97.6	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.4	96.8	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.50	2e-159	561	Ta.13274.1.S1_at	CK214672	-	-	2e-3	At2g38450	-	C.G.	S.X.	Please select
0.07	6e-30	131	Ta.1683.1.S1_x_at	CD871690	-	-	1e-27	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select
0.07	6e-30	131	Ta.1683.1.S1_at	CD871690	-	-	1e-27	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select
0.17	2e-5	50	TaAffx.110025.1.S1_at	CA665253	-	-	9e-1	At4g11385	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.7977.1.S1_at	BT009221.1	-	-	1e-30	At3g26370	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.5212.1.A1_s_at	BJ278621	-	-	4e-2	At1g30890	integral membrane HRF1 family protein	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.5212.1.A1_at	BJ278621	-	-	4e-2	At1g30890	integral membrane HRF1 family protein	C.G.	S.X.	Please select
0.01	1e+0	34	Ta.4957.1.S1_at	CK164879	-	-	4e-50	At4g16760	ACX1 (ACYL-COA OXIDASE 1)	C.G.	S.X.	Please select
0.03	1e+0	34	Ta.350.1.A1_s_at	CD492203	CBFIIIa-6.2	-	3e+1	At4g05070	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	7e-2	38	Arabidopsis thaliana	At5g05360	830418	unknown protein	F:unknown;P:biological_process unknown;C:chloroplast;POB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	1e-4	48	Glycine max	GmaAffx.71546.1.S1_at	CA935555	-	-	1e-2	At5g05360	unknown protein	C.G.	S.X.	Please select
0.52	1e-162	571	Hordeum vulgare	Contig8828_at	Contig8828	-	-	7e-3	At2g38450	-	C.G.	S.X.	Please select
0.41	8e-105	381	Oryza sativa	Os03g0298600	AK066846.1	-	-	4e-1	At2g38450	-	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.07	4e-4	46	Populus trichocarpa	PtpAffx.41142.1.S1_at	CV255722	hypothetical protein	-	5e-1	At5g05360	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	5e+0	30	Vitis vinifera	1614706_s_at	CF605994	-	-	4e-3	At5g43410	ethylene-responsive factor, putative	C.G.	S.X.	Please select
0.09	3e-2	38	Zea mays	Zm.9743.2.A1_at	BM337550	-	-	5e+0	At3g14930	HEME1	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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