Gene omics information

Query gene ID	Ta.13272.1.A1_s_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.83	93.4	Ta.13272.1.A1_s_at	CD885703	-	-	6e+0	At4g08790	nitrilase, putative	S.X.	H.G.	Please select
0.60	81.0	Ta.6268.1.A1_at	BJ306810	-	-	8e-2	At4g32551	LUG (LEUNIG)	S.X.	H.G.	Please select
0.60	81.0	Ta.2803.1.S1_at	BJ322551	-	-	1e+0	At5g46030	unknown protein	S.X.	H.G.	Please select
0.50	72.4	Ta.13272.1.A1_at	CD885703	-	-	6e+0	At4g08790	nitrilase, putative	S.X.	H.G.	Please select
0.50	72.4	Ta.3718.1.A1_x_at	BE403709	-	-	5e+0	At5g52710	heavy-metal-associated domain-containing protein	S.X.	H.G.	Please select
0.32	44.4	Ta.4661.1.S1_s_at	BG314545	-	-	2e-27	At5g47010	LBA1 (LOW-LEVEL BETA-AMYLASE 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.6	97.8	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.5	96.9	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.3	96.7	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.3	96.7	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.3	96.7	GSM139929	Anther immature pollen rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.2	96.6	GSM139916	Anther leptotene-pachytene rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.1	96.4	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.1	96.4	GSM139912	Anther pre-meiosis rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.0	96.3	GSM139924	Anther telophaseI-telophaseII rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.8	96.0	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.94	0	960	Ta.13272.1.A1_at	CD885703	-	-	6e+0	At4g08790	nitrilase, putative	C.G.	S.X.	Please select
0.78	4e-174	611	Ta.18143.1.A1_at	BJ230756	-	-	1e+0	At1g30230	elongation factor 1-beta / EF-1-beta	C.G.	S.X.	Please select
0.04	9e-27	121	TaAffx.121937.1.S1_at	BG263835	-	-	5e-9	At1g79090	unknown protein	C.G.	S.X.	Please select
0.03	4e-7	56	Ta.11856.1.S1_at	CA594218	-	-	6e-5	At3g22270	unknown protein	C.G.	S.X.	Please select
0.06	7e-3	42	Ta.11856.2.S1_a_at	CA602465	-	-	4e+0	At3g22050	receptor-like protein kinase-related	C.G.	S.X.	Please select
0.01	4e-1	36	Ta.238.1.S1_at	AF109395.1	granule-bound starch synthase GBSSII	-	2e-14	At1g32900	starch synthase, putative	C.G.	S.X.	Please select
0.03	2e+0	34	TaAffx.55987.1.S1_at	CA658772	-	-	7e-8	At5g41360	XPB2	C.G.	S.X.	Please select
0.03	2e+0	34	TaAffx.55987.1.S1_x_at	CA658772	-	-	7e-8	At5g41360	XPB2	C.G.	S.X.	Please select
0.03	2e+0	34	TaAffx.104424.1.S1_at	CA696492	-	-	2e-1	At1g19350	BES1 (BRI1-EMS-SUPPRESSOR 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	6e+0	32	Arabidopsis thaliana	At4g08790	826449	nitrilase, putative	F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, nitrilase activity;P:response to cadmium ion, nitrogen compound metabolic process;C:unknown;BOMFPAV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	5e-1	36	Glycine max	GmaAffx.87839.1.S1_at	BQ629424	-	-	1e-9	At4g00090	transducin family protein / WD-40 repeat family protein	C.G.	S.X.	Please select
0.55	2e-63	242	Hordeum vulgare	Contig19281_at	Contig19281	-	-	1e+0	At1g70470	unknown protein	C.G.	S.X.	Please select
0.11	1e-67	258	Oryza sativa	Os02g0294700	AK070497.1	-	Conserved hypothetical protein	7e-6	At1g79090	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	3e-2	40	Populus trichocarpa	PtpAffx.99112.1.A1_s_at	CV277001	hypothetical protein	-	6e+0	At3g57810	OTU-like cysteine protease family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	2e+0	32	Vitis vinifera	1612365_s_at	CB347859	hypothetical protein LOC100241678	-	3e-1	At1g76930	ATEXT4 (EXTENSIN 4)	C.G.	S.X.	Please select
0.04	4e-8	57	Zea mays	Zm.4515.1.S1_at	CO528625	hypothetical protein LOC100272651	-	2e-2	At1g79090	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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