CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.13250.2.S1_x_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.37 53.0 Ta.13250.2.S1_x_at CK158867 - - 7e-4 At5g20720 CPN20 (CHAPERONIN 20) S.X. H.G.
0.93 98.7 Ta.1381.2.S1_x_at BQ172233 - - 2e+0 At3g07480 electron carrier/ iron-sulfur cluster binding S.X. H.G.
0.86 94.1 Ta.1381.2.S1_at BQ172233 - - 2e+0 At3g07480 electron carrier/ iron-sulfur cluster binding S.X. H.G.
0.75 89.8 Ta.1452.1.S1_at CA601014 - - 4e-4 At1g48350 ribosomal protein L18 family protein S.X. H.G.
0.71 88.0 Ta.621.2.S1_x_at CK211230 - - 8e+0 At1g74970 RPS9 (RIBOSOMAL PROTEIN S9) S.X. H.G.
0.67 86.3 Ta.3100.2.S1_x_at CA619410 - - 1e-3 At2g43030 ribosomal protein L3 family protein S.X. H.G.
0.67 86.3 Ta.3100.1.S1_x_at CK196277 - - 1e-1 At2g43030 ribosomal protein L3 family protein S.X. H.G.
0.63 83.1 Ta.1452.1.S1_x_at CA601014 - - 4e-4 At1g48350 ribosomal protein L18 family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
12.4 99.4 GSM343686 Wheat var. Kennedy_Fp inoculated_rep1 GSE13660 Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
11.5 99.3 GSM343687 Wheat var. Kennedy_Fp inoculated_rep2 GSE13660 Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
10.4 99.2 GSM343678 Wheat var. Kennedy_control_rep1 GSE13660 Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
9.9 99.1 GSM343682 Wheat var. Kennedy_control_rep2 GSE13660 Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
9.5 99.1 GSM343685 Wheat var. Kennedy_control_rep3 GSE13660 Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
9.4 99.1 GSM343688 Wheat var. Kennedy_Fp inoculated_rep3 GSE13660 Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.9 98.0 GSM250887 TcLr34_3dpi_mock_rep1 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.9 97.3 GSM314266 tissue type: seedling, leaf - rep1 GSE12508 Transcription patterns during wheat development
4.4 96.8 GSM250899 TcLr34_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.4 96.8 GSM250893 TcLr34_3dpi_mock_rep2 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.68 0 1287 Ta.13250.1.S1_a_at CK153818 - - 2e-4 At5g20720 CPN20 (CHAPERONIN 20) C.G. S.X.
0.34 2e-87 323 Ta.13250.3.S1_at CA675670 - - 5e+0 At5g37760 DNAJ heat shock N-terminal domain-containing protein C.G. S.X.
0.38 7e-78 291 Ta.26382.1.A1_at CD490925 - - 1e+0 At3g19580 AZF2 (ARABIDOPSIS ZINC-FINGER PROTEIN 2) C.G. S.X.
0.14 2e-65 250 Ta.12084.1.A1_x_at CA704357 - - 2e+1 At5g48270 unknown protein C.G. S.X.
0.14 2e-65 250 Ta.12084.1.A1_at CA704357 - - 2e+1 At5g48270 unknown protein C.G. S.X.
0.34 1e-57 224 Ta.13048.1.A1_at CA484462 - - 2e-3 At5g20720 CPN20 (CHAPERONIN 20) C.G. S.X.
0.33 2e-56 220 Ta.26738.1.A1_at CD491007 - - 3e-2 At5g20720 CPN20 (CHAPERONIN 20) C.G. S.X.
0.12 2e-10 67 Ta.1321.1.S1_at CA711483 - - 2e+0 At5g09830 BolA-like family protein C.G. S.X.
0.10 2e-10 67 Ta.1321.1.S1_s_at CA711483 - - 2e+0 At5g09830 BolA-like family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 7e-4 46 Arabidopsis thaliana At5g20720 832195 CPN20 (CHAPERONIN 20) Encodes a chloroplast co-chaperonin with similarity to CPN21 from spinach, E.coli GroES. - - - C.G. S.X.
0.12 2e-4 48 Glycine max Gma.10871.1.S1_at CD403269 - - 8e-22 At5g20720 CPN20 (CHAPERONIN 20) C.G. S.X.
0.68 0 1124 Hordeum vulgare Contig3840_at Contig3840 - - 2e-3 At5g20720 CPN20 (CHAPERONIN 20) C.G. S.X.
0.48 6e-123 442 Oryza sativa Os06g0196900 AK065072.1 - 20 kDa chaperonin, chloroplast precursor (ProteinCpn21) (Chloroplast protein Cpn10) (Chloroplastchaperonin 10) (Ch-CPN10) (Chaperonin 20) 2e-3 At5g20720 CPN20 (CHAPERONIN 20) C.G. S.X.
0.02 4e+0 34 Populus trichocarpa PtpAffx.77223.1.S1_at CF233285 hypothetical protein - 8e-1 At4g21140 unknown protein C.G. S.X.
0.05 2e-1 36 Vitis vinifera 1614856_at CD718534 hypothetical protein LOC100267892 - 4e-11 At5g20720 CPN20 (CHAPERONIN 20) C.G. S.X.
0.35 1e-77 289 Zea mays Zm.2592.1.S1_at BM351079 hypothetical protein LOC100191248 - 1e-5 At5g20720 CPN20 (CHAPERONIN 20) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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