Gene omics information

Query gene ID Ta.13247.1.S1_a_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5779.2Ta.13247.1.S1_a_atCK198318--9e-9At1g47240NRAMP2S.X.H.G.
0.4464.5Ta.22212.1.S1_atCA730396--2e+0At4g21980APG8A (AUTOPHAGY 8A)S.X.H.G.
0.3651.9Ta.29505.1.S1_x_atCK196483--7e+0At4g21980APG8A (AUTOPHAGY 8A)S.X.H.G.
0.3346.9Ta.25522.1.S1_atCK197714--6e-1At1g10360ATGSTU18 (GLUTATHIONE S-TRANSFERASE TAU 18)S.X.H.G.
0.3142.7Ta.5210.2.S1_atBQ168369--4e-2At2g02020proton-dependent oligopeptide transport (POT) family proteinS.X.H.G.
0.2939.2Ta.13247.2.S1_a_atCA646751--5e-6At1g47240NRAMP2S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
22.999.8GSM143506Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
17.599.7GSM143505Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
17.599.7GSM298091Leaf tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
16.699.6GSM250914Tc_7dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
13.199.4GSM143507Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
11.499.3GSM143515Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
8.198.8GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.198.8GSM143517Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
8.098.8GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
7.698.7GSM143520Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.490636Ta.13247.2.S1_a_atCA646751--5e-6At1g47240NRAMP2C.G.S.X.
0.036e-756Ta.1252.1.S1_atBJ293974--4e-6At4g16830nuclear RNA-binding protein (RGGA)C.G.S.X.
0.042e-654Ta.24639.1.S1_a_atCK199553--2e-3At5g47090unknown proteinC.G.S.X.
0.042e-654Ta.24639.1.S1_x_atCK199553--2e-3At5g47090unknown proteinC.G.S.X.
0.034e-550Ta.8095.1.S1_atCK198187--2e+0At3g60650unknown proteinC.G.S.X.
0.024e-550Ta.5804.1.S1_atCK197990--2e-1At5g34869unknown proteinC.G.S.X.
0.024e-550Ta.5406.1.S1_atCK195780--1e-2At4g17690peroxidase, putativeC.G.S.X.
0.034e-550Ta.28866.2.A1_s_atCK193087--5e-1At2g17300unknown proteinC.G.S.X.
0.032e-448Ta.22768.1.S1_atBE430332--7e-3At2g31370bZIP transcription factor (POSF21)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.069e-961Arabidopsis thalianaAt1g47240841127NRAMP2Member of the NRAMP2 gene family of metal ion transporters.---C.G.S.X.
0.103e-963Glycine maxGmaAffx.35912.1.S1_atBE822265--4e-14At1g47240NRAMP2C.G.S.X.
0.710916Hordeum vulgareContig24105_atContig24105--9e-2At2g23150NRAMP3 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3)C.G.S.X.
0.282e-116420Oryza sativaOs03g0208500AK065481.1-Integral membrane protein1e-12At5g67330ATNRAMP4C.G.S.X.
0.085e-240Populus trichocarpaPtpAffx.134269.1.A1_atCV277353--3e-5At2g23150NRAMP3 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3)C.G.S.X.
0.021e+130Vitis vinifera1607793_atCF515792hypothetical protein LOC100263187-9e-11At5g02120OHP (ONE HELIX PROTEIN)C.G.S.X.
0.294e-111400Zea maysZm.13647.1.S1_atAY107242.1metal transporter Nramp3-3e-12At5g67330ATNRAMP4C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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