Gene omics information

Query gene ID Ta.13125.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.2Ta.13125.1.S1_atCD490995--2e+0At3g59380FTA (FARNESYLTRANSFERASE A)S.X.H.G.
0.1922.4Ta.26661.1.A1_atCD491498--4e-10At5g19760dicarboxylate/tricarboxylate carrier (DTC)S.X.H.G.
0.1415.8TaAffx.38217.1.S1_atBJ244494--7e+0At5g11690ATTIM17-3S.X.H.G.
0.089.4Ta.6548.2.S1_a_atBJ307506--4e+0At5g07930MCT2 (mei2 C-Terminal RRM only like 2)S.X.H.G.
0.067.6Ta.8093.2.S1_a_atCA615237--1e-12At5g65760serine carboxypeptidase S28 family proteinS.X.H.G.
0.034.7TaAffx.118620.1.S1_atBJ316617--1e+0At2g31560unknown proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
34.299.9GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
21.499.7GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
15.699.6GSM298054Leaf tissue of Harnesk at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
11.499.3GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
11.199.3GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
10.999.3GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.599.1GSM246396SB57_Stem_ rep1_at anthesisGSE9767Genotypic differences in water soluble carbohydrate metabolism in stem
8.999.0GSM143508Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.198.5GSM143526Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.698.3GSM298056Leaf tissue of Harnesk at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.144e-44178Ta.27161.1.S1_atCK161726--5e-4At3g59380FTA (FARNESYLTRANSFERASE A)C.G.S.X.
0.024e-136TaAffx.32266.1.A1_atCK214783--2e+0At2g25080ATGPX1 (GLUTATHIONE PEROXIDASE 1)C.G.S.X.
0.032e+034TaAffx.118937.3.S1_atBJ212599--2e-1At5g27810sequence-specific DNA binding / transcription factorC.G.S.X.
0.032e+034TaAffx.107511.1.S1_atCA632217--2e+1At5g57980RPB5C (RNA POLYMERASE II FIFTH LARGEST SUBUNIT, C)C.G.S.X.
0.036e+032TaAffx.80775.1.S1_atCA692702--6e+0At3g20900unknown proteinC.G.S.X.
0.036e+032TaAffx.29142.1.S1_atCA649585--2e-4At1g78050PGM (PHOSPHOGLYCERATE/BISPHOSPHOGLYCERATE MUTASE)C.G.S.X.
0.036e+032TaAffx.111109.1.S1_atCA647809--4e+0At5g28690unknown proteinC.G.S.X.
0.026e+032Ta.7472.1.A1_atBQ168472--2e+0At3g28940avirulence-responsive protein, putative / avirulence induced gene (AIG) protein, putativeC.G.S.X.
0.016e+032Ta.664.1.S1_atCK153186--1e-8At1g11910aspartyl protease family proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+034Arabidopsis thalianaAt3g59380825107FTA (FARNESYLTRANSFERASE A)Encodes the alpha-subunit shared between protein farnesyltransferase and protein geranylgeranyltransferase-I. Involved in protein prenylation: covalent attachment of the C-15 isoprene farnesyl or the C-20 isoprene geranylgeranyl groups to the C-terminal end of some proteins. Involved in shoot and flower meristem homeostasis, and response to ABA and drought. Also regulates leaf cell shape. Mutant is epistatic to era1.---C.G.S.X.
0.035e-136Glycine maxGmaAffx.36998.1.S1_s_atBM093848--1e+1At5g25530DNAJ heat shock protein, putativeC.G.S.X.
0.301e-58226Hordeum vulgareContig12731_atContig12731--2e-4At3g59380FTA (FARNESYLTRANSFERASE A)C.G.S.X.
0.323e-71270Oryza sativaOs09g0514400AK060892.1-Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit (EC2.5.1.58) (EC 2.5.1.59) (CAAX farnesyltransferase alphasubunit) (Ras proteins prenyltransferase alpha)(FTase-alpha) (Type I protein geranyl-geranyltransferasealpha subunit) (GGTase-I-alpha)7e-4At3g59380FTA (FARNESYLTRANSFERASE A)C.G.S.X.
0.031e-138Populus trichocarpaPtpAffx.5315.1.A1_s_atCV236250hypothetical protein-1e-90At4g09800RPS18C (S18 RIBOSOMAL PROTEIN)C.G.S.X.
0.035e-134Vitis vinifera1620731_atCB340492hypothetical protein LOC100255501-1e+0At1g49840unknown proteinC.G.S.X.
0.595e-165579Zea maysZm.12921.1.A1_atCA401711hypothetical protein LOC100273635-6e+0At5g27290unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage