Gene omics information

Query gene ID	Ta.13084.2.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.50	72.4	Ta.13084.2.S1_at	BG904606	-	-	3e+0	At2g21060	ATGRP2B (GLYCINE-RICH PROTEIN 2B)	S.X.	H.G.	Please select
0.60	81.0	Ta.13084.1.S1_at	CA744806	-	-	3e-1	At3g13437	unknown protein	S.X.	H.G.	Please select
0.50	72.4	TaAffx.5779.1.S1_at	BJ307256	-	-	1e-1	At1g35365	unknown protein	S.X.	H.G.	Please select
0.40	58.4	Ta.10423.1.S1_x_at	BJ245813	-	-	1e+0	At5g63905	unknown protein	S.X.	H.G.	Please select
0.33	46.9	Ta.19632.1.S1_at	BT009194.1	-	-	2e-1	At5g63060	transporter	S.X.	H.G.	Please select
0.31	42.7	TaAffx.21100.1.S1_at	CD885592	-	-	1e-1	At4g02790	GTP-binding family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
12.6	99.4	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.4	98.2	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
6.0	98.0	GSM250883	Tc_3dpi_mock_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.9	98.0	GSM250890	Tc_3dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.8	97.9	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.8	97.9	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.8	97.9	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.7	97.9	GSM250901	Tc_7dpi_mock_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.5	97.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.5	97.8	GSM324486	Si- B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.11	4e-21	101	Ta.13084.1.S1_at	CA744806	-	-	3e-1	At3g13437	unknown protein	C.G.	S.X.	Please select
0.11	4e-21	101	Ta.13084.1.S1_a_at	CA744806	-	-	3e-1	At3g13437	unknown protein	C.G.	S.X.	Please select
0.04	6e-2	38	Ta.815.3.S1_s_at	CA677640	-	-	1e+0	At1g17400	unknown protein	C.G.	S.X.	Please select
0.04	2e-1	36	TaAffx.92418.1.S1_at	BJ267240	-	-	2e-2	At3g10930	unknown protein	C.G.	S.X.	Please select
0.04	9e-1	34	TaAffx.78797.1.S1_at	CA727203	-	-	7e-5	At3g11470	4'-phosphopantetheinyl transferase family protein	C.G.	S.X.	Please select
0.03	9e-1	34	TaAffx.71363.1.A1_at	BJ312229	-	-	4e+0	At5g66658	unknown protein	C.G.	S.X.	Please select
0.03	9e-1	34	TaAffx.108556.1.S1_at	CA692789	-	-	2e-2	At3g04720	PR4 (PATHOGENESIS-RELATED 4)	C.G.	S.X.	Please select
0.03	9e-1	34	TaAffx.108556.1.S1_x_at	CA692789	-	-	1e+0	At3g04720	PR4 (PATHOGENESIS-RELATED 4)	C.G.	S.X.	Please select
0.02	9e-1	34	Ta.30840.1.S1_at	CN010306	-	-	2e+0	At5g53820	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e+0	32	Arabidopsis thaliana	At2g21060	816641	ATGRP2B (GLYCINE-RICH PROTEIN 2B)	glycine-rich protein (AtGRP2b)	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	34	Glycine max	GmaAffx.87651.1.S1_at	BQ297286	-	-	3e+0	At3g23255	unknown protein	C.G.	S.X.	Please select
0.04	6e+0	30	Hordeum vulgare	rbaal13n12_s_at	rbaal13n12	-	-	8e+0	At4g13615	four F5 protein-related / 4F5 protein-related	C.G.	S.X.	Please select
0.03	2e+0	34	Oryza sativa	Os07g0538700	CB633388	-	Protein kinase family protein	3e-2	At4g23140	CRK6 (CYSTEINE-RICH RLK 6)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	5e+0	32	Populus trichocarpa	PtpAffx.25223.1.A1_at	CV228678	hypothetical protein	-	3e+0	At5g02530	RNA and export factor-binding protein, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	2e-2	38	Vitis vinifera	1612263_at	CD010822	-	-	1e+0	At5g36190	-	C.G.	S.X.	Please select
0.02	1e+0	32	Zea mays	Zm.2110.1.A1_at	AW267573	-	-	5e-1	At3g45400	exostosin family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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