Gene omics information

Query gene ID	Ta.1305.1.S1_a_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.75	89.8	Ta.1305.1.S1_a_at	CK154793	-	-	2e-65	At1g13950	ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)	S.X.	H.G.	Please select
0.75	89.8	Ta.1305.1.S1_x_at	CK154793	-	-	2e-65	At1g13950	ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)	S.X.	H.G.	Please select
0.55	76.8	Ta.28022.2.A1_at	BJ309684	-	-	1e-47	At5g12250	TUB6 (BETA-6 TUBULIN)	S.X.	H.G.	Please select
0.50	72.4	Ta.214.2.A1_x_at	BJ231272	-	-	1e-131	At5g12250	TUB6 (BETA-6 TUBULIN)	S.X.	H.G.	Please select
0.48	69.0	Ta.214.2.A1_at	BJ231272	-	-	1e-131	At5g12250	TUB6 (BETA-6 TUBULIN)	S.X.	H.G.	Please select
0.33	46.9	Ta.28022.3.S1_x_at	BJ217501	-	-	1e-178	At5g62700	TUB3	S.X.	H.G.	Please select
0.19	22.4	Ta.9381.1.S1_at	CA655992	-	-	8e+0	At5g22930	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.0	98.0	GSM138137	Genotype Domain developing seed at 5 days after anthesis, biological rep3 location SB	GSE5937	Wheat expression level polymorphism study parental genotypes 2 biological reps from SB location
4.3	96.7	GSM138192	genotype B33 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.2	96.6	GSM138194	genotype J15 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.9	96.1	GSM138217	genotype H9 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.9	96.1	GSM111176	genotype E5 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.9	96.1	GSM138158	genotype F36 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.8	96.0	GSM139915	Anther pre-meiosis rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.7	95.8	GSM138150	genotype H10 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.7	95.8	GSM138172	genotype DH95 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.6	95.6	GSM138191	genotype D39 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.90	0	1487	Ta.1305.1.S1_at	CK154793	-	-	2e-65	At1g13950	ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)	C.G.	S.X.	Please select
0.90	0	1487	Ta.1305.1.S1_x_at	CK154793	-	-	2e-65	At1g13950	ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)	C.G.	S.X.	Please select
0.64	0	866	Ta.1305.2.S1_x_at	BJ291943	-	-	9e-60	At1g13950	ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)	C.G.	S.X.	Please select
0.56	0	753	Ta.1305.3.S1_at	CA641627	-	-	7e-45	At1g13950	ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)	C.G.	S.X.	Please select
0.56	0	753	Ta.1305.3.S1_x_at	CA641627	-	-	7e-45	At1g13950	ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)	C.G.	S.X.	Please select
0.17	4e-85	315	TaAffx.9432.1.A1_at	CA598967	-	-	3e-15	At1g13950	ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)	C.G.	S.X.	Please select
0.17	4e-85	315	TaAffx.9432.1.A1_x_at	CA598967	-	-	3e-15	At1g13950	ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)	C.G.	S.X.	Please select
0.35	9e-80	297	Ta.26438.1.S1_at	CA486830	-	-	2e-46	At1g26630	FBR12 (FUMONISIN B1-RESISTANT12)	C.G.	S.X.	Please select
0.25	4e-57	222	Ta.12886.1.S1_at	CA502568	-	-	7e-34	At1g13950	ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.47	2e-65	250	Arabidopsis thaliana	At1g13950	837955	ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)	Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.48	2e-78	293	Glycine max	Gma.6129.2.S1_s_at	AW186006	-	-	1e-34	At1g69410	ELF5A-3 (EUKARYOTIC ELONGATION FACTOR 5A-3)	C.G.	S.X.	Please select
0.64	0	926	Hordeum vulgare	Contig2581_at	Contig2581	-	-	2e-68	At1g13950	ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)	C.G.	S.X.	Please select
0.43	2e-153	543	Oryza sativa	Os12g0507200	AK099039.1	-	Eukaryotic translation initiation factor 5A-2(eIF-5A) (eIF-4D)	9e-49	At1g13950	ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.36	2e-59	230	Populus trichocarpa	Ptp.2026.1.S1_s_at	CK093727	hypothetical protein	-	3e-58	At1g13950	ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.39	4e-76	284	Vitis vinifera	1607236_at	CF206372.1	-	-	2e-46	At1g13950	ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)	C.G.	S.X.	Please select
0.34	6e-85	313	Zea mays	Zm.761.1.S1_at	CF053892	hypothetical protein LOC100192991	-	6e-37	At1g26630	FBR12 (FUMONISIN B1-RESISTANT12)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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