Gene omics information

Query gene ID Ta.12823.1.S1_at
Gene name Ammonium transporter Amt1;1
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8092.2Ta.12823.1.S1_atCA638403Ammonium transporter Amt1;1-2e-20At4g13510AMT1S.X.H.G.
0.8393.4Ta.5484.1.A1_x_atCA671571--1e+0At4g19680IRT2S.X.H.G.
0.8092.2Ta.12823.1.S1_s_atCA638403--2e-20At4g13510AMT1S.X.H.G.
0.6182.0Ta.8830.2.S1_x_atCA647852--3e-1At1g06475unknown proteinS.X.H.G.
0.6081.0Ta.27156.1.S1_atBT009507.1--1e+0At4g36720HVA22K (HVA22-LIKE PROTEIN K)S.X.H.G.
0.4464.5Ta.8913.1.S1_s_atCD373694--1e+1At4g04745unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
79.6100.0GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat development
74.2100.0GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat development
72.1100.0GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat development
46.499.9GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat development
40.499.9GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat development
26.099.8GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat development
2.793.3GSM298085Crown tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
2.592.5GSM298072Crown tissue of Paragon at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
2.492.0GSM298088Crown tissue of Solstice at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
1.988.9GSM298086Crown tissue of Solstice at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9703402Ta.12823.1.S1_s_atCA638403--2e-20At4g13510AMT1C.G.S.X.
0.5801049Ta.27312.1.S1_x_atBT009318.1Ammonium transporter-8e-17At4g13510AMT1C.G.S.X.
0.017e-240Ta.15913.1.A1_atBQ161457--6e-10At3g18660PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1)C.G.S.X.
0.013e-138Ta.29367.1.S1_atBJ224721--5e-1At5g46780VQ motif-containing proteinC.G.S.X.
0.013e-138Ta.23127.2.S1_x_atCA644702--2e-1At5g07600oleosin / glycine-rich proteinC.G.S.X.
0.023e-138Ta.23127.3.S1_atCA640346--2e+0At3g21850ASK9 (ARABIDOPSIS SKP1-LIKE 9)C.G.S.X.
0.021e+036TaAffx.93426.1.S1_atBJ211294--2e-5At2g34900IMB1 (IMBIBITION-INDUCIBLE 1)C.G.S.X.
0.011e+036TaAffx.69754.1.S1_atBE216983--7e+0At5g47080CKB1C.G.S.X.
0.011e+036TaAffx.55881.1.S1_x_atCA744754--2e-2At2g47910CRR6 (chlororespiratory reduction 6)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.162e-20101Arabidopsis thalianaAt4g13510826983AMT1Encodes a plasma membrane localized ammonium transporter. Contains a cytosolic trans-activation domain essential for ammonium uptake.---C.G.S.X.
0.042e-1275Glycine maxGma.9265.1.S1_atBU551320--6e-6At4g28700AMT1C.G.S.X.
0.440890Hordeum vulgareContig20708_atContig20708--1e-4At4g13510AMT1C.G.S.X.
0.6501602Oryza sativaOs02g0620600AK107204.1-Rh-like protein/ammonium transporter familyprotein2e-17At4g13510AMT1C.G.S.X.
0.132e-965Populus trichocarpaPtp.5712.1.S1_atCK113355ammonium transporter-3e-28At1g64780ATAMT1C.G.S.X.
0.028e-548Vitis vinifera1610744_atCF415597hypothetical protein LOC100258016-1e+0At2g47170ARF1A1CC.G.S.X.
0.242e-37157Zea maysZm.11141.1.S1_atAY106810.1hypothetical protein LOC100272903-1e-7At1g64780ATAMT1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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