CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.12753.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 88.0 Ta.12753.1.S1_at CD926424 - - 5e+0 At1g18130 tRNA synthetase-related / tRNA ligase-related S.X. H.G.
0.67 86.3 Ta.6416.1.S1_at CK154083 - - 5e-15 At2g38110 GPAT6 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 6) S.X. H.G.
0.67 86.3 TaAffx.71607.1.A1_at CK208297 - - 2e+1 At3g14670 unknown protein S.X. H.G.
0.67 86.3 Ta.14062.1.S1_a_at CK156520 - - 1e-1 At1g67840 CSK (CHLOROPLAST SENSOR KINASE) S.X. H.G.
0.60 81.0 Ta.14062.2.S1_a_at BJ218508 - - 1e+0 At2g30615 - S.X. H.G.
0.56 78.6 Ta.21957.1.S1_at CK212193 - - 6e+0 At2g21185 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.4 97.7 GSM314276 tissue type: pistil, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
4.9 97.3 GSM314277 tissue type: pistil, before anthesis - rep3 GSE12508 Transcription patterns during wheat development
4.8 97.2 GSM314275 tissue type: pistil, before anthesis - rep1 GSE12508 Transcription patterns during wheat development
3.8 96.0 GSM138193 genotype B33 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.4 95.2 GSM138171 genotype C31 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.9 94.0 GSM111237 genotype F38b developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
2.9 94.0 GSM111147 genotype RL4452 developing seed at 5 days after anthesis, biological rep2 GSE4929 wheat expression level polymorphism study parental genotypes 2 biological reps
2.7 93.3 GSM138187 genotype F38b developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.7 93.3 GSM111176 genotype E5 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
2.6 92.9 GSM111178 genotype DH95 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.23 1e-25 117 TaAffx.78624.1.S1_at CA729932 - - 3e+0 At4g01220 - C.G. S.X.
0.05 4e-4 46 Ta.12059.1.S1_at CA698257 - - 5e+0 At1g55365 unknown protein C.G. S.X.
0.01 2e-2 40 Ta.7561.1.S1_x_at BQ806632 - - 7e-67 At4g02060 PRL (PROLIFERA) C.G. S.X.
0.01 2e-2 40 Ta.7561.1.S1_at BQ806632 - - 7e-67 At4g02060 PRL (PROLIFERA) C.G. S.X.
0.03 9e-2 38 Ta.27188.1.S1_at BT009156.1 - - 1e-1 At5g52240 MSBP1 (membrane steroid binding protein 1) C.G. S.X.
0.04 3e-1 36 TaAffx.31539.1.S1_at CA613636 - - 7e-1 At3g14595 unknown protein C.G. S.X.
0.03 3e-1 36 TaAffx.26518.1.S1_at CA688064 - - 9e-1 At4g22660 F-box family protein C.G. S.X.
0.02 3e-1 36 TaAffx.15726.1.S1_at CA722542 - - 7e+0 At3g44180 syntaxin-related family protein C.G. S.X.
0.04 3e-1 36 TaAffx.107645.1.S1_at CA697104 - - 4e+0 At2g25260 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 5e+0 32 Arabidopsis thaliana At1g18130 838392 tRNA synthetase-related / tRNA ligase-related F:threonine-tRNA ligase activity, aminoacyl-tRNA ligase activity, ATP binding;P:threonyl-tRNA aminoacylation, translation;C:membrane;BOMAFP - - - C.G. S.X.
0.03 5e-1 36 Glycine max HgAffx.10150.1.A1_at CB378351 - - 3e-1 At2g17710 unknown protein C.G. S.X.
0.64 4e-141 500 Hordeum vulgare Contig23598_at Contig23598 - - 4e+0 At2g36026 - C.G. S.X.
0.20 3e-77 289 Oryza sativa Os08g0562500 AK063515.1 - Transferase family protein 1e+0 At5g23940 EMB3009 (embryo defective 3009) C.G. S.X.
0.03 7e+0 32 Populus trichocarpa PtpAffx.220758.1.S1_at pmrna37180 hypothetical protein - 3e+0 At4g24026 unknown protein C.G. S.X.
0.10 3e-5 48 Vitis vinifera 1611086_at CF415431 hypothetical protein LOC100249245 - 3e-13 At5g23940 EMB3009 (embryo defective 3009) C.G. S.X.
0.34 4e-91 333 Zea mays Zm.6275.2.A1_at AY109866.1 hypothetical protein LOC100191512 - 2e+0 At4g05590 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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