Gene omics information

Query gene ID	Ta.12695.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	92.2	Ta.12695.1.S1_at	CD373734	-	-	8e-3	At5g54170	-	S.X.	H.G.	Please select
0.80	92.2	Ta.28670.1.S1_x_at	CA625828	-	-	4e-33	At3g63410	APG1 (ALBINO OR PALE GREEN MUTANT 1)	S.X.	H.G.	Please select
0.55	76.8	Ta.28670.1.S1_at	CA625828	-	-	4e-33	At3g63410	APG1 (ALBINO OR PALE GREEN MUTANT 1)	S.X.	H.G.	Please select
0.35	49.8	Ta.21023.1.S1_s_at	CA642252	-	-	1e+0	At5g49280	hydroxyproline-rich glycoprotein family protein	S.X.	H.G.	Please select
0.31	42.7	Ta.27728.1.S1_at	AF314182.2	triose phosphate translocator	-	3e-22	At5g46110	APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2)	S.X.	H.G.	Please select
0.31	42.7	Ta.5949.1.S1_at	CD919637	-	-	6e-4	At3g54660	GR (GLUTATHIONE REDUCTASE)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.0	98.8	GSM298065	Leaf tissue of Paragon at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.5	98.6	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.0	98.5	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
7.0	98.5	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
6.6	98.3	GSM298079	Leaf tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.7	97.9	GSM298080	Leaf tissue of Solstice at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.6	97.8	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.5	97.8	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.5	97.8	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.3	97.6	GSM298077	Leaf tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.48	2e-142	506	TaAffx.27263.1.S1_at	CA679098	-	-	4e+0	At5g36710	unknown protein	C.G.	S.X.	Please select
0.04	2e-6	54	TaAffx.50304.1.S1_at	CA742936	-	-	3e+0	At1g74840	myb family transcription factor	C.G.	S.X.	Please select
0.04	2e-6	54	TaAffx.47246.1.A1_at	CA736511	-	-	1e+1	At5g64730	transducin family protein / WD-40 repeat family protein	C.G.	S.X.	Please select
0.04	2e-6	54	TaAffx.22886.1.S1_at	CA743693	-	-	2e+0	At5g57950	26S proteasome regulatory subunit, putative	C.G.	S.X.	Please select
0.04	2e-6	54	TaAffx.22870.1.S1_at	CA744776	-	-	6e-1	At5g46873	-	C.G.	S.X.	Please select
0.04	2e-6	54	TaAffx.104947.1.S1_at	CA742531	-	-	4e+0	At5g42900	unknown protein	C.G.	S.X.	Please select
0.04	2e-6	54	TaAffx.104879.1.S1_at	CA743615	-	-	3e+0	At4g19003	VPS25	C.G.	S.X.	Please select
0.04	8e-6	52	TaAffx.78177.1.S1_at	CA736461	-	-	4e-2	At4g01023	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.04	8e-6	52	TaAffx.78201.1.S1_at	CA736140	-	-	2e-10	At1g67440	emb1688 (embryo defective 1688)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	8e-3	42	Arabidopsis thaliana	At5g54170	835505	-	F:molecular_function unknown;P:response to wounding;C:unknown;MPO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	1e-2	42	Glycine max	GmaAffx.89523.1.A1_at	CK606544	-	-	7e-6	At5g18030	auxin-responsive protein, putative	C.G.	S.X.	Please select
0.55	0	1106	Hordeum vulgare	Contig2139_at	Contig2139	-	-	4e-6	At1g64720	CP5	C.G.	S.X.	Please select
0.39	7e-85	315	Oryza sativa	Os.11750.1.A1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.06	2e-1	38	Populus trichocarpa	PtpAffx.1508.1.S1_at	CV253876	hypothetical protein	-	1e-23	At1g64720	CP5	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.07	4e-5	48	Vitis vinifera	1617345_s_at	CF514945	hypothetical protein LOC100247984	-	3e-21	At1g64720	CP5	C.G.	S.X.	Please select
0.32	2e-23	109	Zea mays	Zm.14099.1.A1_at	CO531535	hypothetical protein AY107844 /// hypothetical protein LOC100191642	-	2e+0	At4g14500	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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