Gene omics information

Query gene ID Ta.12687.1.S1_at
Gene name 5-enolpyruvylshikimate 3-phosphate synthase
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8593.8Ta.12687.1.S1_atBJ2642435-enolpyruvylshikimate 3-phosphate synthase-2e-34At1g488603-phosphoshikimate 1-carboxyvinyltransferase, putative / 5-enolpyruvylshikimate-3-phosphate, putative / EPSP synthase, putativeS.X.H.G.
0.5475.5Ta.2576.2.S1_atBJ321004Elongation factor-1e-97At1g56070LOS1S.X.H.G.
0.5374.9Ta.659.3.S1_x_atCD878859Translation elongation factor 1 alpha-subunit-0At1g07920elongation factor 1-alpha / EF-1-alphaS.X.H.G.
0.5374.9Ta.27454.2.S1_atBJ241826Cyclophilin-3e-14At2g29960CYP5 (CYCLOPHILIN 5)S.X.H.G.
0.5273.7Ta.14644.2.S1_x_atBJ228287--3e-14At1g08830CSD1 (COPPER/ZINC SUPEROXIDE DISMUTASE 1)S.X.H.G.
0.5072.4Ta.1902.2.S1_a_atCK209206--3e-4At5g36230eIF4-gamma/eIF5/eIF2-epsilon domain-containing proteinS.X.H.G.
0.5072.4Ta.24987.1.S1_atCK166034Cytosolic malate dehydrogenase-1e-64At5g43330malate dehydrogenase, cytosolic, putativeS.X.H.G.
0.4767.9Ta.4852.1.S1_atCK198834--4e-12At1g48850EMB1144 (embryo defective 1144)S.X.H.G.
0.4767.9Ta.28664.1.S1_s_atBQ579127--2e+0At5g50770AtHSD6 (hydroxysteroid dehydrogenase 6)S.X.H.G.
0.4666.8Ta.7286.2.S1_a_atCA595037--5e+0At5g19230unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.896.0GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.395.0GSM343685Wheat var. Kennedy_control_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.194.5GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.994.0GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
2.492.0GSM143522Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
2.391.5GSM138174genotype A81 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.391.5GSM139930Anther immature pollen rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.391.5GSM343678Wheat var. Kennedy_control_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
2.291.0GSM111232genotype H8 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
2.190.3GSM139926Anther tetrads rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.381e-94347Ta.26746.1.A1_atCD491034--9e-36At2g453003-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthaseC.G.S.X.
0.162e-31137Ta.19144.1.S1_atCA647851--1e+0At3g04943LCR41 (Low-molecular-weight cysteine-rich 41)C.G.S.X.
0.026e-136TaAffx.37703.1.S1_atBJ268324--1e+1At5g59990-C.G.S.X.
0.026e-136TaAffx.122624.1.S1_atCD885407--6e-9At3g54190-C.G.S.X.
0.026e-136TaAffx.105979.1.S1_atCA727004--7e-2At5g61030GR-RBP3 (glycine-rich RNA-binding protein 3)C.G.S.X.
0.036e-136Ta.5986.1.S1_atBJ293317--6e-1At3g60647unknown proteinC.G.S.X.
0.026e-136Ta.19136.1.A1_atCK198279--2e+0At1g80050APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2)C.G.S.X.
0.023e+034Ta.8629.1.A1_atBQ162147lipid transfer protein-2e-2At3g60647unknown proteinC.G.S.X.
0.013e+034Ta.5993.1.S1_atCK192868--6e-1At2g42750DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.272e-34147Arabidopsis thalianaAt1g488608413083-phosphoshikimate 1-carboxyvinyltransferase, putative / 5-enolpyruvylshikimate-3-phosphate, putative / EPSP synthase, putativeF:3-phosphoshikimate 1-carboxyvinyltransferase activity, catalytic activity, transferase activity, transferring alkyl or aryl (other than methyl) groups;P:glyphosate metabolic process, aromatic amino acid family biosynthetic process;C:chloroplast;BOPAFM---C.G.S.X.
0.292e-1481Glycine maxGmaAffx.90764.1.S1_atCF805757--8e-42At2g453003-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthaseC.G.S.X.
0.375e-86317Hordeum vulgarebasd0c03_s_atbasd0c03--3e+0At3g16770ATEBP (ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN)C.G.S.X.
0.450753Oryza sativaOs06g0133900AB016765.1-5-enolpyruvylshikimate-3-phosphate synthase (EC2.5.1.19) (Fragment)2e-35At2g453003-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthaseC.G.S.X.
0.222e-1791Populus trichocarpaPtp.2568.1.S1_s_atCV2463193-phosphoshikimate 1-carboxyvinyltransferase-7e-53At1g488603-phosphoshikimate 1-carboxyvinyltransferase, putative / 5-enolpyruvylshikimate-3-phosphate, putative / EPSP synthase, putativeC.G.S.X.
0.156e-23107Vitis vinifera1621725_atCF568814--9e-66At1g488603-phosphoshikimate 1-carboxyvinyltransferase, putative / 5-enolpyruvylshikimate-3-phosphate, putative / EPSP synthase, putativeC.G.S.X.
0.470743Zea maysZm.98.1.S1_atAY106729.13-phosphoshikimate 1-carboxyvinyltransferase-2e-48At1g488603-phosphoshikimate 1-carboxyvinyltransferase, putative / 5-enolpyruvylshikimate-3-phosphate, putative / EPSP synthase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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