Gene omics information

Query gene ID	Ta.12323.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	92.2	Ta.12323.1.A1_at	BQ172096	-	-	6e+0	Atcg00050	-	S.X.	H.G.	Please select
0.80	92.2	Ta.4018.1.S1_at	CD888469	-	-	7e-4	At2g37540	short-chain dehydrogenase/reductase (SDR) family protein	S.X.	H.G.	Please select
0.80	92.2	Ta.28109.1.A1_at	CA617283	-	-	8e-2	At4g23430	short-chain dehydrogenase/reductase (SDR) family protein	S.X.	H.G.	Please select
0.27	35.6	Ta.4702.2.S1_at	BJ270807	-	-	2e-4	At5g49820	emb1879 (embryo defective 1879)	S.X.	H.G.	Please select
0.27	35.6	AFFX-Tae-r2-Bs-lys-5_at	AFFX-Tae-r2-Bs-lys-5	-	-	0			S.X.	H.G.	Please select
0.20	24.0	Ta.7871.3.S1_a_at	CA636480	-	-	7e-1	At1g70470	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
42.8	99.9	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
41.5	99.9	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
40.0	99.9	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
36.5	99.9	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
22.9	99.8	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.2	97.5	GSM111223	genotype H5 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.4	96.8	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.8	96.0	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.7	95.8	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.2	94.8	GSM139924	Anther telophaseI-telophaseII rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.10	1e-28	125	Ta.7871.1.S1_x_at	BQ752923	-	-	1e-39	At2g41540	GPDHC1	C.G.	S.X.	Please select
0.18	2e-9	61	Ta.7871.3.S1_a_at	CA636480	-	-	7e-1	At1g70470	unknown protein	C.G.	S.X.	Please select
0.18	2e-9	61	Ta.7871.3.S1_at	CA636480	-	-	7e-1	At1g70470	unknown protein	C.G.	S.X.	Please select
0.06	2e+0	32	TaAffx.83855.1.S1_at	CA649548	-	-	1e-2	At5g65205	short-chain dehydrogenase/reductase (SDR) family protein	C.G.	S.X.	Please select
0.01	2e+0	32	Ta.7027.1.S1_at	CK204675	-	-	1e+0	At3g16760	tetratricopeptide repeat (TPR)-containing protein	C.G.	S.X.	Please select
0.05	2e+0	32	Ta.1494.1.A1_at	BE430456	-	-	1e+1	At5g64850	unknown protein	C.G.	S.X.	Please select
0.04	2e+0	32	Ta.13599.1.A1_at	BQ170107	-	-	3e-1	At1g75335	unknown protein	C.G.	S.X.	Please select
0.02	6e+0	30	Ta.7905.1.S1_a_at	CK195090	-	-	3e-8	At1g04250	AXR3 (AUXIN RESISTANT 3)	C.G.	S.X.	Please select
0.04	6e+0	30	Ta.3946.3.S1_x_at	CD373869	-	-	5e+0	At3g22360	AOX1B	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.08	6e+0	30	Arabidopsis thaliana	Atcg00050	-	-	Homologous to the bacterial ribosomal protein S16	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.07	9e+0	30	Glycine max	HgAffx.24251.1.S1_at	BF013598	-	-	6e+0	At3g19140	protein binding / zinc ion binding	C.G.	S.X.	Please select
0.10	3e-22	103	Hordeum vulgare	Contig10154_at	Contig10154	-	-	4e-45	At2g41540	GPDHC1	C.G.	S.X.	Please select
0.06	1e+1	30	Oryza sativa	Os08g0265200	9636.m01653	-	-	6e-1	At2g17780	MCA2 (mid1-complementing activity 2)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.08	2e-3	42	Populus trichocarpa	PtpAffx.121097.1.A1_at	CV254721	-	-	6e-1	At3g62190	DNAJ heat shock N-terminal domain-containing protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	2e+0	30	Vitis vinifera	1616344_at	CF209136	hypothetical protein LOC100266776	-	2e-23	At1g63180	UGE3 (UDP-D-glucose/UDP-D-galactose 4-epimerase 3)	C.G.	S.X.	Please select
0.03	1e+1	28	Zea mays	Zm.3027.1.A1_at	AY107517.1	hypothetical protein LOC100192895	-	1e-6	At3g10970	haloacid dehalogenase-like hydrolase family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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