Gene omics information

Query gene ID Ta.12197.1.A1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8192.4Ta.12197.1.A1_atBQ801071--5e+0At3g48231LCR48 (Low-molecular-weight cysteine-rich 48)S.X.H.G.
0.5779.2Ta.8474.1.A1_atBQ161952--6e-15At3g06483PDK (PYRUVATE DEHYDROGENASE KINASE)S.X.H.G.
0.5173.0Ta.16668.1.S1_x_atCK212492--2e+0At3g54826-S.X.H.G.
0.4869.0Ta.25681.1.S1_atAJ614892--3e-2At2g22145-S.X.H.G.
0.4869.0Ta.5857.1.S1_atBJ297508--8e-1At2g17730zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.4666.8Ta.11874.1.S1_atBQ170969--2e+0At5g39530unknown proteinS.X.H.G.
0.4565.2Ta.2839.1.S1_atCD876245--8e-4At4g00026-S.X.H.G.
0.4565.2Ta.12532.1.S1_atBQ166155--2e-8At5g52580RAB GTPase activatorS.X.H.G.
0.4362.2Ta.14353.1.S1_atBU100478--5e-4At5g52200unknown proteinS.X.H.G.
0.4260.9Ta.9300.1.S1_atBJ238999--5e-1At3g08770LTP6S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.596.9GSM111232genotype H8 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
4.196.4GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.996.1GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.495.2GSM298091Leaf tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
3.194.5GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.692.9GSM298079Leaf tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
2.692.9GSM138199genotype C22 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.692.9GSM143505Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
2.592.5GSM138165genotype D15 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.492.0GSM250884Tc_3dpi_inoculated_rep1GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9401041Ta.12197.1.A1_s_atBQ801071--5e+0At3g48231LCR48 (Low-molecular-weight cysteine-rich 48)C.G.S.X.
0.033e-136Ta.20641.1.S1_atCD491265--1e+0Atmg00210-C.G.S.X.
0.031e+034TaAffx.121900.2.S1_x_atCA661067--1e+0At3g15910unknown proteinC.G.S.X.
0.031e+034TaAffx.121900.2.S1_atCA661067--1e+0At3g15910unknown proteinC.G.S.X.
0.031e+034Ta.17883.1.S1_atCA625284--3e+0At5g51620-C.G.S.X.
0.021e+034Ta.10173.1.S1_atBG905567--2e+0At3g13710PRA1.F4 (PRENYLATED RAB ACCEPTOR 1.F4)C.G.S.X.
0.035e+032TaAffx.91392.1.A1_x_atBJ321537--4e+0At3g05860MADS-box protein (AGL45)C.G.S.X.
0.035e+032TaAffx.91392.1.A1_atBJ321537--4e+0At3g05860MADS-box protein (AGL45)C.G.S.X.
0.025e+032TaAffx.19277.1.S1_atCA608865--6e-1At5g23760heavy-metal-associated domain-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.045e+032Arabidopsis thalianaAt3g482313769681LCR48 (Low-molecular-weight cysteine-rich 48)Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family.---C.G.S.X.
0.032e+034Glycine maxGma.1315.2.S1_atBM524843--6e-46At4g21160ZACC.G.S.X.
0.360668Hordeum vulgareContig10510_atContig10510--9e-20At1g13900calcineurin-like phosphoesterase family proteinC.G.S.X.
0.046e-756Oryza sativaOs07g0111600AK100372.1-Purple acid phosphatase2e-8At1g13900calcineurin-like phosphoesterase family proteinC.G.S.X.
0.034e-136Populus trichocarpaPtpAffx.203709.1.S1_s_atpmrna7341hypothetical protein-4e+0At3g23245unknown proteinC.G.S.X.
0.032e+128Vitis vinifera1622228_atCF568837--4e-68At1g52740HTA9 (HISTONE H2A PROTEIN 9)C.G.S.X.
0.052e-342Zea maysZm.13597.1.A1_atCF630886hydrolase/ protein serine/threonine phosphatase-7e-1At1g13900calcineurin-like phosphoesterase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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