Gene omics information

Query gene ID	Ta.12174.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.97	99.6	Ta.12174.1.A1_at	CD452810	-	-	1e-14	At3g03690	UNE7 (unfertilized embryo sac 7)	S.X.	H.G.	Please select
0.32	44.4	TaAffx.130636.1.S1_at	CK204104	-	-	7e+0	At4g24930	thylakoid lumenal 17.9 kDa protein, chloroplast	S.X.	H.G.	Please select
0.29	39.2	TaAffx.111033.1.A1_at	BF474671	-	-	9e-1	At1g26530	unknown protein	S.X.	H.G.	Please select
0.28	39.2	Ta.5749.1.S1_a_at	CA674746	-	-	3e-2	At2g32710	KRP4	S.X.	H.G.	Please select
0.26	33.6	Ta.12189.1.A1_at	BQ171777	-	-	1e+0	At3g28560	-	S.X.	H.G.	Please select
0.25	32.1	Ta.3894.1.S1_at	CA643759	-	-	2e+0	At2g15590	unknown protein	S.X.	H.G.	Please select
0.23	29.0	Ta.10612.1.S1_at	BJ294990	-	-	2e-1	At4g32400	SHS1 (SODIUM HYPERSENSITIVE 1)	S.X.	H.G.	Please select
0.23	29.0	TaAffx.72129.1.S1_at	CA688265	-	-	6e-1	At5g22520	unknown protein	S.X.	H.G.	Please select
0.23	29.0	Ta.3337.1.S1_s_at	BJ308110	-	-	7e-10	At5g09860	nuclear matrix protein-related	S.X.	H.G.	Please select
0.21	25.5	TaAffx.130361.1.S1_at	CK166477	-	-	3e-8	At1g14990	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.4	98.9	GSM298085	Crown tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.6	98.3	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
6.0	98.0	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.8	97.9	GSM298086	Crown tissue of Solstice at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.7	97.9	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.6	97.8	GSM298060	Crown tissue of Harnesk at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.3	97.6	GSM298083	Crown tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.3	97.6	GSM298059	Crown tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.2	97.5	GSM298084	Crown tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.0	97.4	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.22	3e-18	93	Ta.17058.1.S1_at	CA617081	-	-	2e+1	At3g13190	myosin heavy chain-related	C.G.	S.X.	Please select
0.06	6e-7	56	Ta.13955.1.A1_at	BQ752694	-	-	4e-14	At4g03340	glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein	C.G.	S.X.	Please select
0.02	6e-1	36	TaAffx.28702.1.S1_at	BQ789525	-	-	5e+0	At3g06890	unknown protein	C.G.	S.X.	Please select
0.02	6e-1	36	TaAffx.107617.2.S1_x_at	CA711491	-	-	1e+0	At1g78590	NADK3 (NAD(H) KINASE 3)	C.G.	S.X.	Please select
0.02	6e-1	36	Ta.9063.3.S1_at	CA606093	-	-	1e+0	At2g18770	signal recognition particle binding	C.G.	S.X.	Please select
0.02	6e-1	36	Ta.9063.3.S1_x_at	CA606093	-	-	1e+0	At2g18770	signal recognition particle binding	C.G.	S.X.	Please select
0.02	6e-1	36	Ta.7486.1.A1_s_at	BQ170865	-	-	2e-15	At3g63280	ATNEK4 (NIMA-RELATED KINASE 4)	C.G.	S.X.	Please select
0.02	2e+0	34	TaAffx.90204.1.S1_at	BQ606745	-	-	9e-1	At2g48100	exonuclease family protein	C.G.	S.X.	Please select
0.02	2e+0	34	TaAffx.90204.1.S1_s_at	BQ606745	-	-	9e-1	At2g48100	exonuclease family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	1e-14	81	Arabidopsis thaliana	At3g03690	821186	UNE7 (unfertilized embryo sac 7)	F:transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity;P:carbohydrate biosynthetic process, double fertilization forming a zygote and endosperm, pollen tube development;C:endomembrane system, membrane;MPBVO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.09	2e-1	38	Glycine max	GmaAffx.75797.1.S1_at	BI316349	-	-	8e-8	At4g27480	glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein	C.G.	S.X.	Please select
0.76	0	1011	Hordeum vulgare	Contig14045_at	Contig14045	-	-	2e-18	At3g03690	UNE7 (unfertilized embryo sac 7)	C.G.	S.X.	Please select
0.28	4e-28	127	Oryza sativa	Os03g0692000	9631.m04726	-	Glycosyl transferase, family 14 protein	7e-4	At5g15050	glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	8e-4	46	Populus trichocarpa	PtpAffx.58355.1.S1_at	CV230322	hypothetical protein	-	6e-13	At3g15350	glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.11	3e-9	61	Vitis vinifera	1622113_at	CF209612	hypothetical protein LOC100245719	-	4e-61	At5g15050	glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein	C.G.	S.X.	Please select
0.31	6e-39	161	Zea mays	Zm.6873.1.A1_at	CK369786	-	-	2e+1	At4g08870	arginase, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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