Gene omics information

Query gene ID	Ta.12116.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.55	76.8	Ta.12116.1.A1_at	BQ171628	-	-	1e+0	At2g18240	RER1 protein, putative	S.X.	H.G.	Please select
0.71	88.0	TaAffx.37681.1.S1_at	BJ274198	-	-	2e+0	At5g36960	unknown protein	S.X.	H.G.	Please select
0.57	79.2	Ta.2401.1.A1_at	CD883832	-	-	2e-1	At1g02440	ATARFD1A (ADP-ribosylation factor D1A)	S.X.	H.G.	Please select
0.40	58.4	Ta.27940.1.A1_s_at	BQ169626	-	-	1e+0	At1g01380	ETC1 (ENHANCER OF TRY AND CPC 1)	S.X.	H.G.	Please select
0.37	53.0	Ta.12929.1.S1_at	CD938190	-	-	2e+0	At4g24275	-	S.X.	H.G.	Please select
0.33	46.9	TaAffx.61664.2.S1_s_at	CA712482	-	-	1e+0	At4g00232	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.4	98.6	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.1	97.5	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.8	97.2	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.4	96.8	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.2	96.6	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.0	96.3	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.0	96.3	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.6	95.6	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.6	95.6	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	1e+0	34	Ta.11688.1.S1_at	BQ170598	-	-	4e+0	At5g38220	hydrolase	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.26993.1.S1_at	CA682546	-	-	3e-1	At5g42567	-	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.116536.3.S1_at	CA621830	-	-	4e+0	At4g30270	MERI5B (meristem-5)	C.G.	S.X.	Please select
0.01	4e+0	32	Ta.8121.1.S1_at	CA699077	-	-	3e+0	At5g64720	unknown protein	C.G.	S.X.	Please select
0.04	4e+0	32	Ta.26203.2.S1_at	CA609414	-	-	1e-14	At5g06580	FAD linked oxidase family protein	C.G.	S.X.	Please select
0.02	4e+0	32	Ta.26203.1.S1_a_at	CD452707	-	-	7e-9	At5g06580	FAD linked oxidase family protein	C.G.	S.X.	Please select
0.02	4e+0	32	Ta.26203.1.S1_at	CD452707	-	-	7e-9	At5g06580	FAD linked oxidase family protein	C.G.	S.X.	Please select
0.04	4e+0	32	Ta.17991.1.S1_x_at	CA621760	-	-	5e-6	At3g09390	MT2A (METALLOTHIONEIN 2A)	C.G.	S.X.	Please select
0.03	2e+1	30	TaAffx.89425.1.S1_at	CA733679	-	-	4e+0	At4g39560	kelch repeat-containing F-box family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+0	34	Arabidopsis thaliana	At2g18240	816339	RER1 protein, putative	F:molecular_function unknown;P:biological_process unknown;C:integral to membrane;MFPO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	5e+0	32	Glycine max	HgAffx.15510.1.S1_at	CB281484	-	-	9e-1	At4g23330	eukaryotic translation initiation factor-related	C.G.	S.X.	Please select
0.04	2e+0	32	Hordeum vulgare	HZ59M20r_at	HZ59M20r	-	-	7e-1	At3g29305	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	34	Oryza sativa	Os01g0827400	AK108526.1	-	Prenylated rab acceptor PRA1 family protein	6e+0	At2g29125	RTFL2 (ROTUNDIFOLIA LIKE 2)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	3e-1	36	Populus trichocarpa	PtpAffx.46235.1.A1_at	CA823813	-	-	8e-1	At3g29010	catalytic	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	1e+0	32	Vitis vinifera	1616576_at	BQ794313	hypothetical protein LOC100258778	-	3e-19	At1g16040	-	C.G.	S.X.	Please select
0.04	2e+0	32	Zea mays	ZmAffx.1025.1.A1_at	AI770423	-	-	8e-1	At2g25312	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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