Gene omics information

Query gene ID	Ta.11847.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.11847.1.A1_at	BQ170925	-	-	1e+0	At1g49110	unknown protein	S.X.	H.G.	Please select
0.73	89.1	TaAffx.121733.1.S1_at	BJ316403	-	-	2e-3	At3g52910	AtGRF4 (GROWTH-REGULATING FACTOR 4)	S.X.	H.G.	Please select
0.71	88.0	Ta.14323.1.S1_at	BU100287	-	-	1e+1	At4g18593	dual specificity protein phosphatase-related	S.X.	H.G.	Please select
0.53	74.9	TaAffx.16068.1.S1_at	BQ168935	-	-	1e+0	At1g33260	protein kinase family protein	S.X.	H.G.	Please select
0.50	72.4	Ta.10650.1.A1_at	BQ166187	-	-	4e+0	At4g24026	unknown protein	S.X.	H.G.	Please select
0.50	72.4	Ta.6965.1.S1_at	BJ313225	-	-	3e+0	At3g03847	auxin-responsive family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
27.5	99.8	GSM298059	Crown tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
27.0	99.8	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
25.3	99.8	GSM298060	Crown tissue of Harnesk at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
22.3	99.8	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
22.3	99.8	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
15.4	99.6	GSM298084	Crown tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
14.1	99.5	GSM298083	Crown tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
13.6	99.5	GSM298087	Crown tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
13.4	99.5	GSM298088	Crown tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
13.0	99.4	GSM298086	Crown tissue of Solstice at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.21	1e-68	260	TaAffx.121733.1.S1_at	BJ316403	-	-	2e-3	At3g52910	AtGRF4 (GROWTH-REGULATING FACTOR 4)	C.G.	S.X.	Please select
0.03	3e-1	36	TaAffx.28191.1.S1_at	CA654309	-	-	5e-1	At5g21130	-	C.G.	S.X.	Please select
0.02	1e+0	34	TaAffx.120540.1.S1_at	CA745280	-	-	5e-1	At5g62810	PEX14	C.G.	S.X.	Please select
0.03	5e+0	32	TaAffx.37055.1.S1_at	BJ303051	-	-	3e-7	At2g22610	kinesin motor protein-related	C.G.	S.X.	Please select
0.01	5e+0	32	TaAffx.16501.1.S1_at	CD933127	-	-	3e+0	At5g20090	unknown protein	C.G.	S.X.	Please select
0.03	5e+0	32	TaAffx.12298.1.A1_at	BJ273401	-	-	4e+0	At5g28950	unknown protein	C.G.	S.X.	Please select
0.01	5e+0	32	Ta.7720.1.S1_a_at	AJ612921	-	-	1e-56	At2g13560	malate oxidoreductase, putative	C.G.	S.X.	Please select
0.02	5e+0	32	Ta.5125.2.A1_at	BQ169479	-	-	7e+0	At4g21902	unknown protein	C.G.	S.X.	Please select
0.01	5e+0	32	Ta.5125.3.S1_at	CD886264	-	-	3e+0	At5g50140	ankyrin repeat family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+0	34	Arabidopsis thaliana	At1g49110	841334	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	7e+0	32	Glycine max	HgAffx.6889.1.S1_at	CB825322	-	-	5e+0	Atcg00820	-	C.G.	S.X.	Please select
0.03	9e+0	30	Hordeum vulgare	HVSMEl0009A22r2_at	HVSMEl0009A22r2	-	-	4e+0	At1g61093	unknown protein	C.G.	S.X.	Please select
0.07	4e-14	79	Oryza sativa	Os03g0674700	AK058659.1	-	-	1e-9	At4g37740	AtGRF2 (GROWTHREGULATING FACTOR 2)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+0	34	Populus trichocarpa	PtpAffx.50118.1.S1_at	CV258181	hypothetical protein	-	1e+0	At5g12080	MSL10 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 10)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e+0	32	Vitis vinifera	1620029_at	CF512494	-	-	4e+0	At1g58245	-	C.G.	S.X.	Please select
0.14	4e-17	87	Zea mays	Zm.6771.1.A1_at	CF629244	growth-regulating factor 13-like	-	3e-5	At2g36400	AtGRF3 (GROWTH-REGULATING FACTOR 3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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