Gene omics information

Query gene ID	Ta.11732.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.96	99.3	Ta.11732.1.A1_at	BQ170698	-	-	8e-2	At1g29120	unknown protein	S.X.	H.G.	Please select
0.48	69.0	Ta.15813.1.S1_at	CA497008	-	-	5e+0	At4g03280	PETC (PHOTOSYNTHETIC ELECTRON TRANSFER C)	S.X.	H.G.	Please select
0.45	65.2	Ta.15960.1.S1_at	CA502466	-	-	1e+0	At2g01340	unknown protein	S.X.	H.G.	Please select
0.43	62.2	TaAffx.50804.2.S1_s_at	CA735112	-	-	9e-1	At3g07590	small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative	S.X.	H.G.	Please select
0.43	62.2	Ta.27512.1.S1_at	BT009204.1	-	-	2e+0	At3g42310	unknown protein	S.X.	H.G.	Please select
0.42	60.9	Ta.30570.1.A1_at	BJ263950	-	-	4e+0	At5g20150	SPX1 (SPX DOMAIN GENE 1)	S.X.	H.G.	Please select
0.41	59.6	Ta.10305.1.A1_at	BE516999	-	-	6e+0	At5g45775	60S ribosomal protein L11 (RPL11D)	S.X.	H.G.	Please select
0.40	58.4	Ta.14847.1.A1_at	BJ322176	-	-	2e+1	At5g16450	dimethylmenaquinone methyltransferase family protein	S.X.	H.G.	Please select
0.40	58.4	TaAffx.33907.1.S1_at	AJ609988	-	-	8e+0	At5g03270	unknown protein	S.X.	H.G.	Please select
0.40	58.4	Ta.8921.1.A1_at	BQ162637	-	-	3e+0	At1g04230	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
17.1	99.6	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.9	98.7	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.3	98.6	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.2	98.5	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.0	98.5	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.6	98.3	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.3	98.2	GSM139912	Anther pre-meiosis rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.2	98.1	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.7	97.9	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.7	97.9	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.40	1e-93	343	Ta.25795.1.A1_at	CD373978	-	-	1e+0	At2g38340	AP2 domain-containing transcription factor, putative (DRE2B)	C.G.	S.X.	Please select
0.45	4e-84	311	Ta.28089.1.S1_at	CA604133	-	-	1e+0	At5g49015	Expressed protein	C.G.	S.X.	Please select
0.30	1e-59	230	TaAffx.9069.1.S1_at	CA613984	-	-	4e+0	At1g22180	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein	C.G.	S.X.	Please select
0.26	1e-50	200	Ta.844.1.S1_at	CD453032	-	-	3e-1	At4g25560	AtMYB18 (myb domain protein 18)	C.G.	S.X.	Please select
0.14	3e-32	139	Ta.25220.1.S1_x_at	BQ802545	-	-	2e+0	At1g09470	unknown protein	C.G.	S.X.	Please select
0.14	3e-32	139	Ta.25220.1.S1_s_at	BQ802545	-	-	2e+0	At1g09470	unknown protein	C.G.	S.X.	Please select
0.09	6e-15	81	Ta.10894.1.A1_at	BQ166778	-	-	1e-2	At1g28100	unknown protein	C.G.	S.X.	Please select
0.07	2e-9	63	TaAffx.91432.1.S1_at	BJ318763	-	-	2e+0	At3g44950	glycine-rich protein	C.G.	S.X.	Please select
0.15	6e-9	61	Ta.4552.1.S1_at	BJ267884	-	-	1e+0	At1g51930	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	8e-2	38	Arabidopsis thaliana	At1g29120	839787	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;FPMO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e-3	44	Glycine max	GmaAffx.55646.1.S1_s_at	BM884891	-	-	2e-29	At4g35360	pantothenate kinase family protein	C.G.	S.X.	Please select
0.03	6e-1	34	Hordeum vulgare	Contig16208_at	Contig16208	-	-	5e+0	At5g01650	macrophage migration inhibitory factor family protein / MIF family protein	C.G.	S.X.	Please select
0.04	1e-2	42	Oryza sativa	Os.7370.2.A1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	7e-3	42	Populus trichocarpa	PtpAffx.79084.1.S1_at	BU889361	hypothetical protein	-	2e-18	At5g03880	electron carrier	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	6e+0	30	Vitis vinifera	1620737_at	CB976283	-	-	2e+0	At4g36170	unknown protein	C.G.	S.X.	Please select
0.04	1e-1	36	Zea mays	Zm.5999.1.A1_at	AI666113	-	-	3e+0	At4g17190	FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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