CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.11730.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.61 82.0 Ta.11730.1.S1_at CA736324 - - 1e+0 At1g75470 ATPUP15 S.X. H.G.
0.67 86.3 TaAffx.2187.1.S1_at CK211192 - - 4e-2 At3g47300 SELT (SELT-LIKE PROTEIN PRECURSOR) S.X. H.G.
0.61 82.0 Ta.5228.2.A1_a_at BJ283864 - - 2e+1 At5g38050 unknown protein S.X. H.G.
0.50 72.4 Ta.6327.1.S1_at CA639936 - - 1e-2 At5g61530 small G protein family protein / RhoGAP family protein S.X. H.G.
0.44 64.5 Ta.11338.1.S1_at BQ169872 - - 3e+0 At4g08593 unknown protein S.X. H.G.
0.38 54.7 Ta.4059.2.S1_s_at CA701531 - - 4e-2 At3g12360 ITN1 (INCREASED TOLERANCE TO NACL) S.X. H.G.
0.32 44.4 TaAffx.30725.1.S1_s_at CA622632 - - 1e+0 At1g03170 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.5 98.9 GSM143502 Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.7 98.4 GSM143504 Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.1 98.1 GSM143515 Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.9 98.0 GSM143517 Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.8 97.9 GSM143503 Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.5 97.8 GSM143516 Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.4 97.7 GSM143509 Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.3 97.6 GSM143510 Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.1 97.5 GSM143522 Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.0 97.4 GSM143523 Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.61 3e-140 498 TaAffx.84171.1.S1_at CA643341 - - 1e+0 At1g43667 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.48 5e-74 278 TaAffx.25932.1.S1_at CA694071 - - 1e+0 At1g10522 unknown protein C.G. S.X.
0.02 1e-22 107 Ta.187.1.S1_at U10187.1 cytosolic acetyl-CoA carboxylase - 4e-43 At1g36160 ACC1 (ACETYL-COENZYME A CARBOXYLASE 1) C.G. S.X.
0.03 1e+0 34 TaAffx.25240.1.S1_at CA704029 - - 1e+0 At1g11700 unknown protein C.G. S.X.
0.01 1e+0 34 Ta.27777.1.S1_at BJ321823 - - 8e-8 At3g13200 EMB2769 (EMBRYO DEFECTIVE 2769) C.G. S.X.
0.02 1e+0 34 Ta.27712.1.S1_at CK205651 AmiB - 2e-1 At5g63470 NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4) C.G. S.X.
0.01 1e+0 34 Ta.27777.1.S2_s_at BJ239761 avenin-like b precursor-like - 8e-8 At3g13200 EMB2769 (EMBRYO DEFECTIVE 2769) C.G. S.X.
0.01 1e+0 34 Ta.27777.1.S2_at BJ239761 - - 8e-8 At3g13200 EMB2769 (EMBRYO DEFECTIVE 2769) C.G. S.X.
0.03 5e+0 32 TaAffx.92868.1.S1_at BJ244197 - - 3e-1 At4g02075 PIT1 (pitchoun 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e+0 34 Arabidopsis thaliana At1g75470 843883 ATPUP15 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. - - - C.G. S.X.
0.04 2e+0 34 Glycine max GmaAffx.55110.1.A1_at BI969457 - - 8e-4 At1g28580 GDSL-motif lipase, putative C.G. S.X.
0.72 8e-170 595 Hordeum vulgare Contig13153_at Contig13153 - - 4e+0 At1g63460 glutathione peroxidase, putative C.G. S.X.
0.14 1e-20 101 Oryza sativa Os02g0137800 AK101629.1 - Conserved hypothetical protein 8e-2 At1g33040 NACA5 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 5) C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.203122.1.S1_at pmrna6191 hypothetical protein - 2e-1 At4g14358 - C.G. S.X.
0.03 6e+0 30 Vitis vinifera 1614099_at CB976803 - - 4e+0 At5g40855 unknown protein C.G. S.X.
0.03 6e-1 34 Zea mays Zm.4164.1.A1_x_at BM079246 - - 5e+0 At3g01860 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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