Gene omics information

Query gene ID	Ta.11619.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.11619.1.A1_at	CN011986	-	-	2e+1	At3g28958	plastocyanin-like domain-containing protein	S.X.	H.G.	Please select
0.91	98.2	Ta.21020.1.S1_at	CD895774	-	-	3e+0	At3g57710	protein kinase family protein	S.X.	H.G.	Please select
0.83	93.4	Ta.27766.2.S1_at	CD896218	fasciclin-like protein FLA6	-	1e+1	At3g21150	zinc finger (B-box type) family protein	S.X.	H.G.	Please select
0.71	88.0	Ta.10042.1.S1_at	CK205237	-	-	2e-4	At4g28780	GDSL-motif lipase/hydrolase family protein	S.X.	H.G.	Please select
0.67	86.3	Ta.8258.3.S1_at	CN012816	-	-	1e+0	At3g63095	-	S.X.	H.G.	Please select
0.63	83.1	Ta.8258.2.S1_at	BJ233335	-	-	1e+0	At3g63095	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.6	97.8	GSM138175	genotype A81 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.6	95.6	GSM111184	genotype C22 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.4	95.2	GSM138194	genotype J15 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.4	95.2	GSM111186	genotype B68 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.3	95.0	GSM111224	genotype A81 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.3	95.0	GSM111187	genotype B68 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.3	95.0	GSM111249	genotype F87 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.3	95.0	GSM111198	genotype A77 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.3	95.0	GSM111243	genotype C10 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.3	95.0	GSM111192	genotype F38a developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.47	0	634	Ta.21020.1.S1_at	CD895774	-	-	3e+0	At3g57710	protein kinase family protein	C.G.	S.X.	Please select
0.05	2e-2	40	Ta.17038.1.S1_at	CA616926	-	-	4e+0	At5g55850	NOI	C.G.	S.X.	Please select
0.03	7e-2	38	Ta.4885.1.S1_x_at	BJ261548	-	-	4e-4	At4g01150	unknown protein	C.G.	S.X.	Please select
0.04	7e-2	38	Ta.4885.3.S1_x_at	CA622086	-	-	6e-2	At4g01150	unknown protein	C.G.	S.X.	Please select
0.04	7e-2	38	Ta.4885.3.S1_at	CA622086	-	-	6e-2	At4g01150	unknown protein	C.G.	S.X.	Please select
0.02	3e-1	36	Ta.6081.1.S1_a_at	BE517410	-	-	2e+0	At2g35700	ERF38 (ERF FAMILY PROTEIN 38)	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.38426.1.S1_at	BJ232993	-	-	1e-2	At1g27970	NTF2B (NUCLEAR TRANSPORT FACTOR 2B)	C.G.	S.X.	Please select
0.01	1e+0	34	Ta.28467.1.S1_at	AY173961.1	mitogen-activated protein kinase	-	1e+0	At5g55560	protein kinase family protein	C.G.	S.X.	Please select
0.02	5e+0	32	TaAffx.83531.1.S1_at	CA616054	-	-	7e-1	At2g37570	SLT1 (sodium- and lithium-tolerant 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e+1	30	Arabidopsis thaliana	At3g28958	822535	plastocyanin-like domain-containing protein	F:electron carrier activity, copper ion binding;P:unknown;C:unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	4e-1	36	Glycine max	PsAffx.psMA002xD10f_at	PsAffx.psMA002xD10f	-	-	5e+0	At5g66211	unknown protein	C.G.	S.X.	Please select
0.31	2e-43	174	Hordeum vulgare	Contig16712_at	Contig16712	-	-	2e+0	At3g20080	CYP705A15	C.G.	S.X.	Please select
0.07	4e-5	50	Oryza sativa	Os08g0417000	AK068735.1	-	2OG-Fe(II) oxygenase domain containing protein	7e-4	At5g62240	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	2e+0	34	Populus trichocarpa	PtpAffx.211962.1.S1_s_at	pmrna23485	hypothetical protein	-	3e-1	At1g64690	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	3e-1	34	Vitis vinifera	1617200_at	CD717033	-	-	3e-7	At2g31070	TCP10 (TCP DOMAIN PROTEIN 10)	C.G.	S.X.	Please select
0.11	9e-15	79	Zea mays	Zm.11732.1.A1_at	BM380298	-	-	2e+1	At3g56710	SIB1 (SIGMA FACTOR BINDING PROTEIN 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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