Gene omics information

Query gene ID	Ta.11481.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.63	83.1	Ta.11481.1.A1_at	BQ170184	-	-	4e-1	At3g59800	unknown protein	S.X.	H.G.	Please select
0.80	92.2	TaAffx.15154.1.S1_s_at	CD883346	-	-	4e-30	At3g21160	mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative	S.X.	H.G.	Please select
0.57	79.2	Ta.128.1.S1_at	U76747.1	Tap	-	5e+0	At5g46730	glycine-rich protein	S.X.	H.G.	Please select
0.56	78.6	Ta.14582.1.S1_at	CK209915	-	-	1e-9	At5g53850	haloacid dehalogenase-like hydrolase family protein	S.X.	H.G.	Please select
0.46	66.8	TaAffx.98061.1.S1_s_at	BG607189	-	-	3e-1	At1g66140	ZFP4 (ZINC FINGER PROTEIN 4)	S.X.	H.G.	Please select
0.44	64.5	Ta.2286.1.S1_at	BJ308253	SGT1-1 protein	-	6e-8	At4g23570	SGT1A	S.X.	H.G.	Please select
0.40	58.4	Ta.27317.1.S1_a_at	CF133127	-	-	2e-20	At3g05090	transducin family protein / WD-40 repeat family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.6	92.9	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.3	91.5	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.3	91.5	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.2	91.0	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.2	91.0	GSM111232	genotype H8 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.2	91.0	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.1	90.3	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
2.1	90.3	GSM139921	Anther diplotene-anaphaseI rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.1	90.3	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.0	89.7	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.11	3e-23	109	TaAffx.122098.1.S1_at	CA636060	-	-	4e+0	At5g64210	AOX2	C.G.	S.X.	Please select
0.03	2e+0	34	TaAffx.22806.1.S1_at	CA744761	-	-	3e+0	At1g76650	calcium-binding EF hand family protein	C.G.	S.X.	Please select
0.03	2e+0	34	TaAffx.12929.2.S1_at	BJ225102	-	-	1e+0	At1g68530	KCS6 (3-KETOACYL-COA SYNTHASE 6)	C.G.	S.X.	Please select
0.03	2e+0	34	TaAffx.112537.1.S1_at	CA623181	-	-	4e+0	At3g10480	no apical meristem (NAM) family protein	C.G.	S.X.	Please select
0.02	2e+0	34	Ta.22697.1.S1_at	CD869780	-	-	3e-15	At4g17640	CKB2	C.G.	S.X.	Please select
0.02	6e+0	32	TaAffx.30393.1.S1_at	CA624950	-	-	2e-12	At2g47910	CRR6 (chlororespiratory reduction 6)	C.G.	S.X.	Please select
0.02	6e+0	32	TaAffx.28297.1.S1_at	CA662096	-	-	1e+0	At4g36410	UBC17 (UBIQUITIN-CONJUGATING ENZYME 17)	C.G.	S.X.	Please select
0.02	6e+0	32	TaAffx.23906.1.S1_at	CA728504	-	-	2e-5	At2g20190	CLASP (CLIP-ASSOCIATED PROTEIN)	C.G.	S.X.	Please select
0.02	6e+0	32	TaAffx.128418.132.A1_at	BJ257811	-	-	1e+0	At1g34560	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	4e-1	36	Arabidopsis thaliana	At3g59800	825149	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;MOFPBVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	GmaAffx.21483.1.S1_at	BI970330	-	-	2e-2	At2g03110	RNA binding / nucleic acid binding	C.G.	S.X.	Please select
0.53	7e-106	383	Hordeum vulgare	HVSMEa0014O07r2_at	HVSMEa0014O07r2	-	-	3e-1	At3g59800	unknown protein	C.G.	S.X.	Please select
0.09	5e-2	40	Oryza sativa	Os02g0714000	AK067428.1	-	RGP-3 (Fragment)	3e-1	At1g22910	RNA recognition motif (RRM)-containing protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	8e+0	32	Populus trichocarpa	PtpAffx.56135.1.A1_at	CV276623	hypothetical protein	-	1e+0	At2g39975	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	4e-1	34	Vitis vinifera	1618214_at	CF212729	-	-	3e+0	At2g26720	plastocyanin-like domain-containing protein / mavicyanin, putative	C.G.	S.X.	Please select
0.08	3e-6	52	Zea mays	Zm.5803.1.A1_at	AI691266	-	-	2e+0	At5g45370	nodulin-related / integral membrane family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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