Gene omics information

Query gene ID	Ta.10650.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.3	Ta.10650.1.A1_at	BQ166187	-	-	4e+0	At4g24026	unknown protein	S.X.	H.G.	Please select
0.80	92.2	TaAffx.16068.1.S1_at	BQ168935	-	-	1e+0	At1g33260	protein kinase family protein	S.X.	H.G.	Please select
0.67	86.3	Ta.14323.1.S1_at	BU100287	-	-	1e+1	At4g18593	dual specificity protein phosphatase-related	S.X.	H.G.	Please select
0.67	86.3	Ta.6965.1.S1_at	BJ313225	-	-	3e+0	At3g03847	auxin-responsive family protein	S.X.	H.G.	Please select
0.60	81.0	TaAffx.91428.1.S1_at	BJ313181	-	-	3e+0	At4g21450	vesicle-associated membrane family protein / VAMP family protein	S.X.	H.G.	Please select
0.44	64.5	Ta.30534.1.S1_at	BJ287888	-	-	2e+0	At2g20830	folic acid binding / transferase	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
26.5	99.8	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
22.8	99.8	GSM298059	Crown tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
22.4	99.8	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
19.9	99.7	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
19.6	99.7	GSM298060	Crown tissue of Harnesk at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
14.4	99.5	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
14.0	99.5	GSM298093	Crown tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
12.4	99.4	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development
12.2	99.4	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
11.9	99.4	GSM298074	Crown tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e-1	36	TaAffx.90055.1.S1_x_at	BQ609014	-	-	3e-1	At1g62240	unknown protein	C.G.	S.X.	Please select
0.03	3e-1	36	TaAffx.90055.1.S1_at	BQ609014	-	-	3e-1	At1g62240	unknown protein	C.G.	S.X.	Please select
0.04	3e-1	36	TaAffx.19522.1.S1_at	BJ303286	-	-	1e+0	At4g30050	unknown protein	C.G.	S.X.	Please select
0.03	3e-1	36	Ta.29486.1.A1_a_at	CD868705	-	-	1e-7	At5g07960	unknown protein	C.G.	S.X.	Please select
0.03	3e-1	36	Ta.29486.1.A1_at	CD868705	-	-	1e-7	At5g07960	unknown protein	C.G.	S.X.	Please select
0.04	3e-1	36	Ta.2621.2.S1_at	CA630495	-	-	1e-6	At5g07960	unknown protein	C.G.	S.X.	Please select
0.04	3e-1	36	Ta.2621.3.S1_at	CA719347	-	-	3e-4	At5g07960	unknown protein	C.G.	S.X.	Please select
0.02	3e-1	36	Ta.14313.1.S1_x_at	CK163888	-	-	1e-6	At1g05500	NTMC2T2.1	C.G.	S.X.	Please select
0.05	1e+0	34	TaAffx.37244.1.S1_at	BJ291007	-	-	1e+0	At1g25025	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	4e+0	32	Arabidopsis thaliana	At4g24026	6240360	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	4e-1	36	Glycine max	PsAffx.C134000021_at	PsAffx.C134000021	-	-	2e+0	At4g26840	SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1)	C.G.	S.X.	Please select
0.04	5e-1	34	Hordeum vulgare	HVSMEl0015O12r2_at	HVSMEl0015O12r2	-	-	3e+0	At3g01220	ATHB20 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 20)	C.G.	S.X.	Please select
0.19	1e-10	67	Oryza sativa	Os01g0194200	AK073282.1	-	IQ calmodulin-binding region domain containingprotein	8e-1	At5g16390	CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	4e-1	36	Populus trichocarpa	PtpAffx.24069.1.S1_s_at	CV275960	hypothetical protein	-	3e-1	At1g55310	SR33	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	5e+0	30	Vitis vinifera	1618133_at	CF404967	hypothetical protein LOC100259114	-	2e-1	At5g28610	-	C.G.	S.X.	Please select
0.11	3e-11	67	Zea mays	Zm.16892.1.A1_at	CO520304	calmodulin binding protein	-	2e-2	At3g22190	IQD5 (IQ-domain 5)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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