Gene omics information

Query gene ID	Ta.10569.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.57	79.2	Ta.10569.1.A1_at	CK208173	-	-	1e+0	At5g18590	kelch repeat-containing protein	S.X.	H.G.	Please select
0.57	79.2	Ta.7161.1.S1_at	BJ316315	-	-	3e+0	Atmg00840	-	S.X.	H.G.	Please select
0.55	76.8	Ta.10026.1.A1_at	BJ236992	calcium-dependent protein kinase	-	1e-15	At3g51850	CPK13	S.X.	H.G.	Please select
0.36	51.9	Ta.11183.1.A1_at	CD933832	-	-	2e+0	At3g57230	AGL16 (AGAMOUS-LIKE 16)	S.X.	H.G.	Please select
0.29	39.2	Ta.5793.1.A1_a_at	CD895981	-	-	4e-11	At5g55230	ATMAP65-1 (MICROTUBULE-ASSOCIATED PROTEINS 65-1)	S.X.	H.G.	Please select
0.22	27.1	Ta.6495.1.A1_at	CD936212	-	-	5e+0	Atcg00150	-	S.X.	H.G.	Please select
0.19	22.4	TaAffx.36682.1.A1_at	BJ320081	-	-	4e+0	Atmg00060	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
11.8	99.3	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
10.3	99.2	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
10.1	99.2	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
8.2	98.8	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.0	98.5	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.6	98.3	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.4	98.2	GSM139924	Anther telophaseI-telophaseII rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.4	98.2	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.1	98.1	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development
6.0	98.0	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	2e-5	50	Ta.1624.1.S1_at	BE445223	-	-	7e-8	At5g18590	kelch repeat-containing protein	C.G.	S.X.	Please select
0.04	2e-2	40	TaAffx.83601.1.S1_at	CA655639	-	-	7e-2	At1g73740	glycosyl transferase family 28 protein	C.G.	S.X.	Please select
0.01	9e-2	38	Ta.2525.1.S1_at	CD938347	-	-	4e-28	At3g01090	AKIN10 (Arabidopsis SNF1 kinase homolog 10)	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.9494.1.S1_a_at	CK199730	-	-	1e-8	At1g53580	GLY3 (GLYOXALASE II 3)	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.26169.1.A1_at	CD452458	-	-	1e+0	At1g78170	unknown protein	C.G.	S.X.	Please select
0.02	6e+0	32	TaAffx.39404.1.A1_at	BJ242448	-	-	2e+0	At1g64510	ribosomal protein S6 family protein	C.G.	S.X.	Please select
0.03	6e+0	32	TaAffx.128541.38.S1_at	CA663066	-	-	4e+0	At3g52700	unknown protein	C.G.	S.X.	Please select
0.03	6e+0	32	TaAffx.12105.1.A1_at	BJ294207	-	-	2e-1	At5g04280	glycine-rich RNA-binding protein	C.G.	S.X.	Please select
0.02	6e+0	32	Ta.6270.1.A1_at	CD491665	-	-	8e+0	At4g03635	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e+0	34	Arabidopsis thaliana	At5g18590	831977	kelch repeat-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cytosol;MOPFBAV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	Gma.10529.2.S1_a_at	BU927530	-	-	1e-2	At3g59600	NRPB8B	C.G.	S.X.	Please select
0.07	7e-4	44	Hordeum vulgare	Contig22834_at	Contig22834	-	-	4e-12	At5g18590	kelch repeat-containing protein	C.G.	S.X.	Please select
0.14	1e-11	71	Oryza sativa	Os12g0538800	AK100645.1	-	Galactose oxidase, central domain containingprotein	5e+0	At5g18590	kelch repeat-containing protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	7e+0	32	Populus trichocarpa	PtpAffx.203224.1.S1_at	pmrna6389	hypothetical protein	-	8e-15	At1g63170	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	6e+0	30	Vitis vinifera	1622580_at	CF403741	-	-	2e-1	At3g32090	transcription factor-related	C.G.	S.X.	Please select
0.24	6e-7	54	Zea mays	Zm.10082.1.A1_at	BM378776	hypothetical protein LOC100279529	-	3e-10	At5g18590	kelch repeat-containing protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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