Gene omics information

Query gene ID	Ta.10520.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.10520.1.S1_at	AL828817	-	-	2e-2	At4g29780	unknown protein	S.X.	H.G.	Please select
0.77	90.8	Ta.7143.1.S1_x_at	BJ316053	-	-	2e+1	At5g60840	unknown protein	S.X.	H.G.	Please select
0.67	86.3	Ta.7143.2.S1_x_at	CK192888	-	-	2e+1	At5g19380	unknown protein	S.X.	H.G.	Please select
0.60	81.0	Ta.7143.1.S1_a_at	BJ316053	-	-	2e+1	At5g60840	unknown protein	S.X.	H.G.	Please select
0.47	67.9	Ta.9239.1.A1_x_at	CD937104	-	-	2e+1	At5g06210	RNA-binding protein, putative	S.X.	H.G.	Please select
0.44	64.5	Ta.9239.1.A1_at	CD937104	-	-	2e+1	At5g06210	RNA-binding protein, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
20.8	99.7	GSM138153	genotype G32 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
20.5	99.7	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
17.4	99.6	GSM138184	genotype C25 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
13.4	99.5	GSM138188	genotype F38a developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
12.9	99.4	GSM138154	genotype H5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
12.0	99.4	GSM138200	genotype F48 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
11.4	99.3	GSM111236	genotype F38b developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
10.3	99.2	GSM138136	Genotype Domain developing seed at 5 days after anthesis, biological rep1 location SB	GSE5937	Wheat expression level polymorphism study parental genotypes 2 biological reps from SB location
9.5	99.1	GSM138149	genotype F29 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
9.3	99.0	GSM111178	genotype DH95 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.27	1e-138	494	Ta.10520.2.S1_a_at	CA723151	-	-	3e+0	At1g54210	ATG12A (AUTOPHAGY 12 A)	C.G.	S.X.	Please select
0.27	1e-138	494	Ta.10520.2.S1_x_at	CA723151	-	-	3e+0	At1g54210	ATG12A (AUTOPHAGY 12 A)	C.G.	S.X.	Please select
0.09	6e-30	133	Ta.7143.2.S1_x_at	CK192888	-	-	2e+1	At5g19380	unknown protein	C.G.	S.X.	Please select
0.08	6e-27	123	Ta.7143.3.S1_a_at	CA730168	-	-	4e+0	At1g11700	unknown protein	C.G.	S.X.	Please select
0.04	1e-6	56	Ta.7143.1.S1_a_at	BJ316053	-	-	2e+1	At5g60840	unknown protein	C.G.	S.X.	Please select
0.04	1e-6	56	Ta.7143.1.S1_x_at	BJ316053	-	-	2e+1	At5g60840	unknown protein	C.G.	S.X.	Please select
0.02	4e-3	44	TaAffx.105684.1.S1_at	CA730971	-	-	4e+0	At5g62210	embryo-specific protein-related	C.G.	S.X.	Please select
0.01	7e-2	40	TaAffx.51406.1.S1_at	CA600281	-	-	1e-1	At5g13910	LEP (LEAFY PETIOLE)	C.G.	S.X.	Please select
0.02	7e-2	40	TaAffx.108870.1.S1_at	CA683119	-	-	4e+0	At5g19090	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	2e-2	42	Arabidopsis thaliana	At4g29780	829100	unknown protein	F:unknown;P:unknown;C:cellular_component unknown;MPF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.11	1e-13	79	Glycine max	GmaAffx.85640.1.S1_at	AW703774	-	-	1e+0	At5g57290	60S acidic ribosomal protein P3 (RPP3B)	C.G.	S.X.	Please select
0.85	0	1943	Hordeum vulgare	Contig4976_at	Contig4976	-	-	4e+0	At5g12010	unknown protein	C.G.	S.X.	Please select
0.61	0	1223	Oryza sativa	Os01g0582600	9629.m03821	-	Conserved hypothetical protein	7e-5	At4g29780	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.07	2e-6	56	Populus trichocarpa	PtpAffx.29056.1.S1_at	DN500805	hypothetical protein	-	6e-6	At5g12010	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.12	6e-18	91	Vitis vinifera	1619478_at	CD004753	hypothetical protein LOC100247440	-	3e-9	At5g12010	unknown protein	C.G.	S.X.	Please select
0.30	1e-90	333	Zea mays	Zm.11770.1.A1_at	BM380607	hypothetical protein LOC100191551	-	9e-5	At5g12010	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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