CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.1038.2.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.2 Ta.1038.2.S1_at BJ264834 - - 2e+0 At5g60990 DEAD/DEAH box helicase, putative (RH10) S.X. H.G.
0.60 81.0 Ta.8888.1.A1_at BE418963 - - 1e+1 At5g64890 PROPEP2 (Elicitor peptide 2 precursor) S.X. H.G.
0.17 19.8 Ta.3217.1.A1_at BF293654 - - 9e-1 At4g19003 VPS25 S.X. H.G.
0.07 8.6 Ta.1038.1.S1_a_at BJ321668 - - 2e+0 At3g20040 ATHXK4 S.X. H.G.
0.01 2.4 TaAffx.120412.1.A1_at BJ221402 - - 3e+0 At3g23230 ethylene-responsive factor, putative S.X. H.G.
0.00 0.7 Ta.888.3.A1_x_at CA674139 - - 9e-1 At5g64680 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
13.7 99.5 GSM138209 genotype H23 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
10.6 99.2 GSM111197 genotype J15 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
9.2 99.0 GSM138183 genotype A10 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
9.2 99.0 GSM111225 genotype A81 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
8.8 98.9 GSM111185 genotype C22 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
7.8 98.7 GSM138201 genotype F48 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
7.1 98.5 GSM111202 genotype A10 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
7.0 98.5 GSM138166 genotype G30 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
7.0 98.5 GSM314275 tissue type: pistil, before anthesis - rep1 GSE12508 Transcription patterns during wheat development
6.9 98.4 GSM138199 genotype C22 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.45 3e-132 472 Ta.1038.1.S1_a_at BJ321668 - - 2e+0 At3g20040 ATHXK4 C.G. S.X.
0.04 1e-2 42 TaAffx.86471.1.S1_at CA607400 - - 7e+0 At5g46873 - C.G. S.X.
0.02 6e-1 36 TaAffx.84740.1.S1_at CA629995 - - 4e+0 At4g09810 transporter-related C.G. S.X.
0.02 6e-1 36 Ta.4214.2.A1_at CA690783 - - 6e-2 At3g10915 reticulon family protein C.G. S.X.
0.02 3e+0 34 TaAffx.26640.1.S1_at CA686825 - - 4e+0 At3g59540 60S ribosomal protein L38 (RPL38B) C.G. S.X.
0.02 3e+0 34 TaAffx.25386.1.S1_s_at CA700938 - - 2e-2 At2g37860 LCD1 (LOWER CELL DENSITY 1) C.G. S.X.
0.02 3e+0 34 TaAffx.25386.1.S1_at CA700938 - - 2e-2 At2g37860 LCD1 (LOWER CELL DENSITY 1) C.G. S.X.
0.02 3e+0 34 TaAffx.11123.1.S1_at BQ608905 - - 1e+0 At4g32890 zinc finger (GATA type) family protein C.G. S.X.
0.02 3e+0 34 Ta.26384.1.A1_at CD490928 - - 4e+0 At5g41650 lactoylglutathione lyase family protein / glyoxalase I family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 2e+0 34 Arabidopsis thaliana At5g60990 836220 DEAD/DEAH box helicase, putative (RH10) F:helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding;P:unknown;C:cellular_component unknown;BOMFPAV - - - C.G. S.X.
0.02 2e-1 38 Glycine max GmaAffx.92671.1.S1_at CF808396 - - 3e+0 At1g60913 - C.G. S.X.
0.02 1e+0 34 Hordeum vulgare HVSMEn0016F16r2_at HVSMEn0016F16r2 - - 6e+0 At5g53410 unknown protein C.G. S.X.
0.02 1e+0 36 Oryza sativa Os.37473.1.S1_x_at - - - 0 C.G. S.X.
0.02 3e+0 34 Populus trichocarpa PtpAffx.223755.1.S1_at pmrna41914 - - 4e-28 Atcg00650 - C.G. S.X.
0.02 2e-1 36 Vitis vinifera 1618918_at CA817284 - - 3e-10 At1g78915 binding C.G. S.X.
0.02 3e-1 36 Zea mays Zm.2175.1.S1_at AW288761 hypothetical protein LOC100278437 - 7e-1 At2g35470 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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