Gene omics information

Query gene ID	Ta.10378.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.61	82.0	Ta.10378.1.S1_at	BJ245196	-	-	7e+0	At1g62305	unknown protein	S.X.	H.G.	Please select
0.71	88.0	Ta.13406.1.S1_at	BQ606014	-	-	4e+0	At1g26530	unknown protein	S.X.	H.G.	Please select
0.63	83.1	Ta.7229.1.S1_at	CD927748	-	-	6e-6	At1g27595	-	S.X.	H.G.	Please select
0.63	83.1	Ta.13406.1.S1_x_at	BQ606014	-	-	4e+0	At1g26530	unknown protein	S.X.	H.G.	Please select
0.56	78.6	Ta.8133.1.S1_at	CA655541	-	-	2e-1	At4g34050	caffeoyl-CoA 3-O-methyltransferase, putative	S.X.	H.G.	Please select
0.54	75.5	Ta.7558.1.S1_at	CK154884	-	-	2e+0	At1g06475	unknown protein	S.X.	H.G.	Please select
0.53	74.9	Ta.13375.1.S1_at	CA728934	-	-	3e+0	At5g56850	unknown protein	S.X.	H.G.	Please select
0.48	69.0	Ta.26089.1.A1_at	BQ237184	-	-	1e+0	At5g08480	VQ motif-containing protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
22.0	99.8	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
14.7	99.5	GSM139912	Anther pre-meiosis rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
13.5	99.5	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
11.7	99.3	GSM139915	Anther pre-meiosis rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
11.5	99.3	GSM139916	Anther leptotene-pachytene rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
11.1	99.3	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
10.8	99.2	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
10.3	99.2	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
10.1	99.2	GSM139921	Anther diplotene-anaphaseI rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
9.8	99.1	GSM139929	Anther immature pollen rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.24	2e-68	258	Ta.19072.1.S1_at	CD892139	-	-	2e-4	At4g19490	protein binding	C.G.	S.X.	Please select
0.05	1e-1	36	TaAffx.110695.1.S1_at	CA655848	-	-	4e+0	At3g13175	unknown protein	C.G.	S.X.	Please select
0.04	2e+0	32	TaAffx.26387.1.S1_at	CA689358	-	-	4e+0	At1g54020	myrosinase-associated protein, putative	C.G.	S.X.	Please select
0.02	2e+0	32	Ta.9383.1.S1_a_at	BQ483833	-	-	6e-4	At2g37160	transducin family protein / WD-40 repeat family protein	C.G.	S.X.	Please select
0.04	7e+0	30	TaAffx.91795.1.S1_at	BJ302425	-	-	1e+0	At5g19810	proline-rich extensin-like family protein	C.G.	S.X.	Please select
0.04	7e+0	30	TaAffx.59701.1.S1_at	CA596639	-	-	4e+0	At5g47710	C2 domain-containing protein	C.G.	S.X.	Please select
0.03	7e+0	30	TaAffx.38877.1.S1_at	BJ214411	-	-	3e-2	At3g23510	cyclopropane fatty acid synthase, putative / CPA-FA synthase, putative	C.G.	S.X.	Please select
0.04	7e+0	30	TaAffx.32158.1.S1_at	CA599947	-	-	3e-1	At5g49410	unknown protein	C.G.	S.X.	Please select
0.04	7e+0	30	TaAffx.120395.1.S1_at	CA632870	-	-	2e+1	At4g21860	MSRB2 (methionine sulfoxide reductase B 2)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	7e+0	30	Arabidopsis thaliana	At1g62305	842528	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	2e+0	32	Glycine max	GmaAffx.59458.1.S1_at	AW186411	-	-	2e-1	At5g24580	copper-binding family protein	C.G.	S.X.	Please select
0.19	4e-58	222	Hordeum vulgare	Contig13564_at	Contig13564	-	-	8e-4	At4g19490	protein binding	C.G.	S.X.	Please select
0.04	3e+0	32	Oryza sativa	OsAffx.32238.1.S1_x_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	1e+1	30	Populus trichocarpa	PtpAffx.94482.1.S1_at	CX168755	-	-	7e-15	At1g24030	protein kinase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	2e+0	30	Vitis vinifera	1615995_at	CF212592	hypothetical protein LOC100263324	-	2e-10	At4g30270	MERI5B (meristem-5)	C.G.	S.X.	Please select
0.07	7e-1	32	Zea mays	ZmAffx.1208.1.A1_at	BE186278	-	-	8e-1	At1g20580	small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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