Gene omics information

Query gene ID	Ta.10329.3.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.60	81.0	Ta.10329.3.S1_at	CK217164	-	-	2e-21	At5g59690	histone H4	S.X.	H.G.	Please select
0.91	98.2	Ta.10329.17.S1_x_at	BJ308545	-	-	6e-22	At5g59970	histone H4	S.X.	H.G.	Please select
0.80	92.2	Ta.10329.17.S1_at	BJ308545	-	-	6e-22	At5g59970	histone H4	S.X.	H.G.	Please select
0.60	81.0	TaAffx.5129.1.S1_at	CD890710	-	-	5e+0	At1g38790	unknown protein	S.X.	H.G.	Please select
0.30	40.9	Ta.6897.1.S1_at	BJ310110	-	-	6e-19	At5g38110	ASF1B (ANTI- SILENCING FUNCTION 1B)	S.X.	H.G.	Please select
0.27	35.6	TaAffx.44615.1.A1_at	CK208222	-	-	5e-9	At1g07370	PCNA1 (PROLIFERATING CELLULAR NUCLEAR ANTIGEN)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
17.9	99.7	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
16.1	99.6	GSM298093	Crown tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
16.0	99.6	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
14.8	99.5	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development
14.3	99.5	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
12.2	99.4	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
8.4	98.9	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.6	98.7	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
7.4	98.6	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development
7.0	98.5	GSM298063	Crown tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.64	2e-175	615	TaAffx.132315.2.S1_x_at	BE493709	-	-	3e-22	At5g59690	histone H4	C.G.	S.X.	Please select
0.64	2e-175	615	TaAffx.132315.2.S1_at	BE493709	-	-	3e-22	At5g59690	histone H4	C.G.	S.X.	Please select
0.38	4e-149	527	Ta.10329.13.S1_a_at	BJ217006	-	-	7e-24	At5g59690	histone H4	C.G.	S.X.	Please select
0.38	2e-145	515	Ta.10329.23.S1_at	CK217595	-	-	2e-21	At5g59690	histone H4	C.G.	S.X.	Please select
0.35	2e-142	506	Ta.10329.28.S1_at	BJ273114	-	-	1e-19	At5g59970	histone H4	C.G.	S.X.	Please select
0.35	2e-142	506	Ta.10329.28.S1_x_at	BJ273114	-	-	1e-19	At5g59970	histone H4	C.G.	S.X.	Please select
0.41	6e-142	504	Ta.10329.27.S1_at	BJ219603	-	-	6e-24	At5g59690	histone H4	C.G.	S.X.	Please select
0.40	4e-140	498	Ta.10329.19.S1_x_at	BJ216862	-	-	7e-24	At5g59690	histone H4	C.G.	S.X.	Please select
0.39	4e-140	498	Ta.10329.1.S1_x_at	BJ240295	-	-	7e-24	At5g59690	histone H4	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.33	2e-21	103	Arabidopsis thaliana	At5g59690	836090	histone H4	F:DNA binding;P:nucleosome assembly;C:thylakoid;MOPFV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.44	7e-93	341	Glycine max	PsAffx.C1000260_s_at	PsAffx.C1000260	-	-	9e-10	At5g59690	histone H4	C.G.	S.X.	Please select
0.68	0	720	Hordeum vulgare	Contig500_at	Contig500	-	-	4e-19	At5g59690	histone H4	C.G.	S.X.	Please select
0.45	5e-138	492	Oryza sativa	Os09g0433600	AK058686.1	-	Histone H4	2e-20	At1g07660	histone H4	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.31	1e-23	111	Populus trichocarpa	PtpAffx.104205.1.A1_at	CV277856	-	-	1e-25	At5g59690	histone H4	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.36	5e-32	137	Vitis vinifera	1613076_at	CB970842	-	-	2e-42	At5g59690	histone H4	C.G.	S.X.	Please select
0.39	1e-131	468	Zea mays	Zm.6721.9.A1_a_at	BM380489	Histone H4	-	6e-18	At5g59970	histone H4	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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