Gene omics information

Query gene ID	Ta.10329.27.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.10329.27.S1_at	BJ219603	-	-	6e-24	At5g59690	histone H4	S.X.	H.G.	Please select
0.91	98.2	Ta.7378.18.S1_x_at	CB307642	-	-	5e-25	At1g07790	HTB1	S.X.	H.G.	Please select
0.83	93.4	Ta.7378.18.S1_at	CB307642	-	-	5e-25	At1g07790	HTB1	S.X.	H.G.	Please select
0.77	90.8	Ta.7378.21.S1_at	BJ310041	Histone H2B	-	6e-18	At1g07790	HTB1	S.X.	H.G.	Please select
0.67	86.3	Ta.7378.37.S1_at	BJ306762	-	-	3e-20	At1g07790	HTB1	S.X.	H.G.	Please select
0.67	86.3	Ta.7378.37.S1_x_at	BJ306762	-	-	3e-20	At1g07790	HTB1	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
12.2	99.4	GSM298093	Crown tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
11.8	99.3	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development
11.4	99.3	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
10.7	99.2	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
8.3	98.8	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
7.2	98.5	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.2	98.5	GSM298059	Crown tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.0	98.5	GSM314264	tissue type: seedling, crown - rep2	GSE12508	Transcription patterns during wheat development
7.0	98.5	GSM314263	tissue type: seedling, crown - rep1	GSE12508	Transcription patterns during wheat development
6.8	98.4	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.68	0	636	Ta.10329.24.S1_at	BJ318779	-	-	1e-19	At5g59690	histone H4	C.G.	S.X.	Please select
0.55	1e-173	609	Ta.10329.17.S1_at	BJ308545	-	-	6e-22	At5g59970	histone H4	C.G.	S.X.	Please select
0.55	1e-173	609	Ta.10329.17.S1_x_at	BJ308545	-	-	6e-22	At5g59970	histone H4	C.G.	S.X.	Please select
0.43	2e-162	571	Ta.10329.28.S1_at	BJ273114	-	-	1e-19	At5g59970	histone H4	C.G.	S.X.	Please select
0.43	2e-162	571	Ta.10329.28.S1_x_at	BJ273114	-	-	1e-19	At5g59970	histone H4	C.G.	S.X.	Please select
0.47	9e-162	569	Ta.10329.13.S1_a_at	BJ217006	-	-	7e-24	At5g59690	histone H4	C.G.	S.X.	Please select
0.55	9e-159	559	Ta.10329.19.S1_x_at	BJ216862	-	-	7e-24	At5g59690	histone H4	C.G.	S.X.	Please select
0.57	3e-158	557	Ta.10329.42.S1_at	BQ607338	-	-	1e-16	At5g59690	histone H4	C.G.	S.X.	Please select
0.47	1e-157	555	Ta.10329.36.S1_a_at	BJ316876	-	-	2e-24	At5g59690	histone H4	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.43	6e-24	111	Arabidopsis thaliana	At5g59690	836090	histone H4	F:DNA binding;P:nucleosome assembly;C:thylakoid;MOPFV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.54	7e-86	317	Glycine max	PsAffx.C1000260_s_at	PsAffx.C1000260	-	-	9e-10	At5g59690	histone H4	C.G.	S.X.	Please select
0.66	5e-177	619	Hordeum vulgare	Contig174_x_at	Contig174	-	-	7e-24	At5g59690	histone H4	C.G.	S.X.	Please select
0.55	8e-139	494	Oryza sativa	Os09g0433600	AK058686.1	-	Histone H4	2e-20	At1g07660	histone H4	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.40	7e-9	61	Populus trichocarpa	PtpAffx.4633.2.S1_at	CA823688	-	-	9e-47	At1g07820	histone H4	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.36	3e-38	157	Vitis vinifera	1619121_at	CF415615	hypothetical protein LOC100246791	-	2e-18	At5g59690	histone H4	C.G.	S.X.	Please select
0.49	2e-126	450	Zea mays	Zm.6721.12.A1_s_at	BG265991	Histone H4	-	6e-18	At1g07660	histone H4	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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