Gene omics information

Query gene ID	Ta.10112.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.10112.1.S1_at	CD884721	-	-	4e-12	At3g20650	mRNA capping enzyme family protein	S.X.	H.G.	Please select
0.67	86.3	Ta.490.1.A1_at	CD871537	-	-	8e+0	At5g15970	KIN2	S.X.	H.G.	Please select
0.44	64.5	Ta.3321.1.A1_at	BJ217547	-	-	4e-10	At3g24200	FAD binding / monooxygenase/ oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen	S.X.	H.G.	Please select
0.35	49.8	Ta.8158.1.A1_at	BQ161496	-	-	4e-1	At5g04120	phosphoglycerate/bisphosphoglycerate mutase family protein	S.X.	H.G.	Please select
0.29	39.2	TaAffx.128927.1.A1_at	CK207679	-	-	3e-2	At4g03020	transducin family protein / WD-40 repeat family protein	S.X.	H.G.	Please select
0.19	22.4	Ta.4221.1.S1_at	CD878060	-	-	5e-4	At3g48195	phox (PX) domain-containing protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.7	97.9	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.1	97.5	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.4	96.8	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.3	96.7	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.1	94.5	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.9	94.0	GSM250902	Tc_7dpi_inoculated_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.5	92.5	GSM324490	Si+ B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
2.5	92.5	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.4	92.0	GSM250908	Tc_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.4	92.0	GSM324486	Si- B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.38	3e-127	456	TaAffx.114039.1.S1_x_at	CA599746	-	-	4e+0	At4g30180	transcription factor/ transcription regulator	C.G.	S.X.	Please select
0.38	3e-127	456	TaAffx.114039.1.S1_at	CA599746	-	-	4e+0	At4g30180	transcription factor/ transcription regulator	C.G.	S.X.	Please select
0.02	8e-1	36	TaAffx.107366.1.S1_at	CA701049	-	-	2e+1	At5g15500	ankyrin repeat family protein	C.G.	S.X.	Please select
0.02	3e+0	34	TaAffx.85183.1.S1_at	CA624937	-	-	3e+0	At3g03830	auxin-responsive protein, putative	C.G.	S.X.	Please select
0.02	3e+0	34	TaAffx.81528.3.S1_s_at	CA689316	-	-	3e+0	At5g53290	CRF3 (CYTOKININ RESPONSE FACTOR 3)	C.G.	S.X.	Please select
0.02	3e+0	34	TaAffx.81528.2.S1_at	CA693315	-	-	9e-1	At2g43950	OEP37	C.G.	S.X.	Please select
0.01	3e+0	34	TaAffx.81528.1.S1_s_at	CA686907	-	-	1e+0	At2g43950	OEP37	C.G.	S.X.	Please select
0.02	3e+0	34	TaAffx.32086.1.S1_at	CA601255	-	-	4e+0	At3g31910	-	C.G.	S.X.	Please select
0.02	3e+0	34	TaAffx.128414.102.S1_at	CA704631	-	-	3e-44	Atcg00490	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.22	4e-12	73	Arabidopsis thaliana	At3g20650	821612	mRNA capping enzyme family protein	F:catalytic activity;P:mRNA capping;C:chloroplast;OVMFPB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.09	5e-9	63	Glycine max	Gma.11177.1.S1_at	BU084326	-	-	3e-30	At3g20650	mRNA capping enzyme family protein	C.G.	S.X.	Please select
0.78	0	862	Hordeum vulgare	Contig8299_at	Contig8299	-	-	3e-9	At3g20650	mRNA capping enzyme family protein	C.G.	S.X.	Please select
0.56	2e-144	513	Oryza sativa	Os08g0180000	AK103587.1	-	contains InterPro domain(s): IPR004971	9e-19	At3g20650	mRNA capping enzyme family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.18	8e-8	59	Populus trichocarpa	Ptp.5664.1.S1_at	CV258879	hypothetical protein	-	4e-30	At3g20650	mRNA capping enzyme family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.11	3e-13	75	Vitis vinifera	1612937_at	BQ796823	hypothetical protein LOC100243615	-	8e-11	At3g20650	mRNA capping enzyme family protein	C.G.	S.X.	Please select
0.28	4e-81	301	Zea mays	Zm.7544.1.A1_at	BM334017	mRNA	-	3e-2	At3g20650	mRNA capping enzyme family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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