Gene omics information

Query gene ID PtpAffx.99162.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7393.6PtpAffx.99162.1.S1_atCV279989hypothetical protein-1e+0At2g17870cold-shock DNA-binding family proteinS.X.H.G.
0.6791.1PtpAffx.158132.1.A1_atCV282478hypothetical protein-3e-12At3g43670copper amine oxidase, putativeS.X.H.G.
0.6187.0PtpAffx.225478.1.S1_atpmrna44846hypothetical protein-8e-10At1g29720protein kinase family proteinS.X.H.G.
0.5078.6PtpAffx.219046.1.S1_s_atpmrna34844cytochrome P450 /// cytochrome P450 /// cytochrome P450-9e-2At5g60530late embryogenesis abundant protein-related / LEA protein-relatedS.X.H.G.
0.3863.7PtpAffx.159492.1.A1_atCV277474--1e-2At3g52550-S.X.H.G.
0.2441.8PtpAffx.210950.1.S1_atpmrna21514cationic amino acid transporter-7e-14At4g21120AAT1 (AMINO ACID TRANSPORTER 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.399.4GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
11.299.1GSM372097Clone3200_LPI5_N-_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
10.399.0GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
8.398.5GSM372094Clone3200_LPI5_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
8.198.5GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
6.697.9GSM372045Clone1979_LPI5_N+_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
6.397.7GSM372043Clone1979_LPI5_N-_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
6.297.6GSM372093Clone3200_LPI5_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
5.997.4GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.195.5GSM372100Clone3200_LPI5_N+_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.081e-448PtpAffx.201341.1.S1_atpmrna2658hypothetical protein-3e+0At1g25550myb family transcription factorC.G.S.X.
0.092e-344PtpAffx.216198.1.S1_atpmrna30827hypothetical protein-2e+0At4g05030heavy-metal-associated domain-containing proteinC.G.S.X.
0.082e-344PtpAffx.205921.1.S1_x_atpmrna11749hypothetical protein-1e-1At3g50580unknown proteinC.G.S.X.
0.082e-344PtpAffx.205921.1.S1_atpmrna11749hypothetical protein-1e-1At3g50580unknown proteinC.G.S.X.
0.033e-240PtpAffx.983.1.A1_atCX172753hypothetical protein-5e-10At5g64180unknown proteinC.G.S.X.
0.023e-240PtpAffx.9731.1.S1_atCV255821hypothetical protein-1e+1At5g44582unknown proteinC.G.S.X.
0.013e-240PtpAffx.9792.1.S1_s_atBP930774hypothetical protein-7e-24At1g49760PAB8 (POLY(A) BINDING PROTEIN 8)C.G.S.X.
0.033e-240PtpAffx.97498.1.S1_atCV246186--8e-2At4g09890unknown proteinC.G.S.X.
0.033e-240PtpAffx.95744.1.A1_atCV238553--1e-41At3g55280RPL23AB (RIBOSOMAL PROTEIN L23AB)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+034Arabidopsis thalianaAt2g17870816297cold-shock DNA-binding family proteinF:DNA binding, zinc ion binding, nucleic acid binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;BMOVPFA---C.G.S.X.
0.063e-240Glycine maxGmaAffx.89162.1.S1_s_atCK605562--1e+0At1g04100IAA10C.G.S.X.
0.036e-134Hordeum vulgareHW04B02u_atHW04B02u--8e-1At3g53730histone H4C.G.S.X.
0.031e+132Oryza sativaOs04g0534100AK103012.1-Arabidopsis thaliana protein of unknown functionDUF821 family protein1e-12At1g63420-C.G.S.X.
0.042e+130Triticum aestivumTaAffx.85547.1.S1_atCA621822--6e+0At5g61890AP2 domain-containing transcription factor family proteinC.G.S.X.
0.036e+030Vitis vinifera1618255_atCF516008--1e+0At4g26290unknown proteinC.G.S.X.
0.038e+030Zea maysZmAffx.1070.1.A1_atAI943763--7e-1At5g03090unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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