Gene omics information

Query gene ID PtpAffx.99107.3.A1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5582.2PtpAffx.99107.3.A1_s_atCV240653hypothetical protein-6e-64At4g19640ARA7S.X.H.G.
0.5582.2PtpAffx.135825.1.S1_atCF936294hypothetical protein-8e-34At3g46180UTR5 (UDP-GALACTOSE TRANSPORTER 5)S.X.H.G.
0.4471.9Ptp.7060.1.A1_x_atCV262139hypothetical protein-9e-27At1g23290RPL27ABS.X.H.G.
0.4471.9Ptp.3625.1.A1_atCV267089hypothetical protein-2e-12At3g07560PEX13 (PEROXIN 13)S.X.H.G.
0.3052.0PtpAffx.30368.1.S1_atCV254627hypothetical protein-1e-1At1g76180ERD14 (EARLY RESPONSE TO DEHYDRATION 14)S.X.H.G.
0.2950.5PtpAffx.36802.1.S1_atBP936440hypothetical protein-2e-44At3g17000UBC32 (ubiquitin-conjugating enzyme 32)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.797.3GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
4.696.2GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
3.293.5GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.092.9GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
2.892.1GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.791.8GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
2.691.3GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
2.691.3GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.590.9GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.590.9GSM244435Mlp infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.620829Ptp.1287.1.S1_atDN484332hypothetical protein-7e-87At5g45130RHA1 (RAB HOMOLOG 1)C.G.S.X.
0.530650PtpAffx.99107.1.S1_s_atCV227515hypothetical protein-8e-89At5g45130RHA1 (RAB HOMOLOG 1)C.G.S.X.
0.470648Ptp.5102.1.A1_atCV267337hypothetical protein-1e-88At5g45130RHA1 (RAB HOMOLOG 1)C.G.S.X.
0.470648Ptp.5102.1.A1_x_atCV267337hypothetical protein-1e-88At5g45130RHA1 (RAB HOMOLOG 1)C.G.S.X.
0.574e-149527Ptp.1287.2.S1_s_atCX178052hypothetical protein-2e-73At5g45130RHA1 (RAB HOMOLOG 1)C.G.S.X.
0.163e-1169PtpAffx.113944.1.A1_atCV277800hypothetical protein-2e-9At4g19640ARA7C.G.S.X.
0.042e-344PtpAffx.1398.14.S1_atCV239988hypothetical protein-1e-16At3g54840ARA6C.G.S.X.
0.082e-344PtpAffx.112256.1.S1_atCV256640hypothetical protein-1e-13At5g45130RHA1 (RAB HOMOLOG 1)C.G.S.X.
0.023e-240PtpAffx.204250.1.S1_atpmrna8359hypothetical protein-1e-9At2g16470C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.546e-64244Arabidopsis thalianaAt4g19640827706ARA7Encodes Ara7.---C.G.S.X.
0.232e-24113Glycine maxGma.6207.1.S1_s_atCF922738--7e-16At4g19640ARA7C.G.S.X.
0.337e-1683Hordeum vulgareContig6921_s_atContig6921--7e-22At5g45130RHA1 (RAB HOMOLOG 1)C.G.S.X.
0.232e-22107Oryza sativaOs03g0666500AK061203.1-Ras-related protein RHA19e-40At5g45130RHA1 (RAB HOMOLOG 1)C.G.S.X.
0.324e-1995Triticum aestivumTa.14514.1.S1_a_atCA666379--1e-23At5g45130RHA1 (RAB HOMOLOG 1)C.G.S.X.
0.282e-30131Vitis vinifera1609774_s_atCA817625hypothetical protein LOC100258211-2e-34At5g45130RHA1 (RAB HOMOLOG 1)C.G.S.X.
0.366e-1373Zea maysZm.885.1.S1_atBM080781hypothetical protein LOC100193933-3e-15At4g19640ARA7C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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