Gene omics information

Query gene ID PtpAffx.983.1.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6187.0PtpAffx.983.1.A1_atCX172753hypothetical protein-5e-10At5g64180unknown proteinS.X.H.G.
0.6791.1PtpAffx.258.2.S1_x_atCX171155hypothetical protein-6e-19At1g64750ATDSS1(I) (ARABIDOPSIS THALIANA DELETION OF SUV3 SUPRESSOR 1(I))S.X.H.G.
0.4067.0PtpAffx.904.1.A1_a_atCK097736hypothetical protein-1e-6At3g20510unknown proteinS.X.H.G.
0.3661.6PtpAffx.206821.1.S1_atpmrna13538hypothetical protein-1e-5At5g11030ALF4 (ABERRANT LATERAL ROOT FORMATION 4)S.X.H.G.
0.2645.2PtpAffx.125849.1.A1_atBP934056hypothetical protein-1e+0At5g14800P5CR (PYRROLINE-5- CARBOXYLATE (P5C) REDUCTASE)S.X.H.G.
0.2238.3PtpAffx.25187.1.S1_atBP934847hypothetical protein-2e-90At4g26570ATCBL3 (ARABIDOPSIS THALIANA CALCINEURIN B-LIKE 3)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.396.9GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
5.296.8GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
5.296.8GSM244439Mixed infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.596.1GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.295.6GSM244435Mlp infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.195.5GSM244438Mmd infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.995.1GSM244433Mlp infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.794.7GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.594.3GSM244431non infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.494.0GSM244434Mlp infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e-240PtpAffx.99162.1.S1_atCV279989hypothetical protein-1e+0At2g17870cold-shock DNA-binding family proteinC.G.S.X.
0.024e-240PtpAffx.9731.1.S1_atCV255821hypothetical protein-1e+1At5g44582unknown proteinC.G.S.X.
0.014e-240PtpAffx.9792.1.S1_s_atBP930774hypothetical protein-7e-24At1g49760PAB8 (POLY(A) BINDING PROTEIN 8)C.G.S.X.
0.034e-240PtpAffx.97498.1.S1_atCV246186--8e-2At4g09890unknown proteinC.G.S.X.
0.024e-240PtpAffx.95744.1.A1_atCV238553--1e-41At3g55280RPL23AB (RIBOSOMAL PROTEIN L23AB)C.G.S.X.
0.034e-240PtpAffx.95314.1.A1_atCV252554--4e-2At1g64930CYP89A7C.G.S.X.
0.034e-240PtpAffx.95404.1.A1_atCV247625--1e+0At2g28210ATACA2 (ALPHA CARBONIC ANHYDRASE 2)C.G.S.X.
0.034e-240PtpAffx.94601.1.A1_atCV280245--1e+0At1g66475unknown proteinC.G.S.X.
0.034e-240PtpAffx.95355.1.A1_atCV250509--3e-4At5g61270PIF7 (PHYTOCHROME-INTERACTING FACTOR7)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.215e-1065Arabidopsis thalianaAt5g64180836539unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFB---C.G.S.X.
0.193e-1583Glycine maxGma.13320.1.S1_atBE802768--4e-7At5g64180unknown proteinC.G.S.X.
0.043e-342Hordeum vulgareContig9011_atContig9011--3e-2At5g64180unknown proteinC.G.S.X.
0.106e-859Oryza sativaOs12g05021009640.m03080-Conserved hypothetical protein1e-6At5g64180unknown proteinC.G.S.X.
0.035e-136Triticum aestivumTa.12724.3.S1_atCA601478--9e-1At1g72830NF-YA3 (NUCLEAR FACTOR Y, SUBUNIT A3)C.G.S.X.
0.352e-50198Vitis vinifera1610787_atCF202824.1--4e-19At5g64180unknown proteinC.G.S.X.
0.073e-342Zea maysZm.12186.1.A1_atBM382225--5e-1At1g06160ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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