Gene omics information

Query gene ID PtpAffx.95826.1.A1_at
Gene name
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5984.9PtpAffx.95826.1.A1_atCV231266--2e-12At1g34300lectin protein kinase family proteinS.X.H.G.
0.3458.3PtpAffx.1165.1.A1_atCV243059predicted membrane protein /// predicted membrane protein-1e-26At1g68650unknown proteinS.X.H.G.
0.2950.5Ptp.3296.2.S1_s_atCV232156hypothetical protein-7e-1At1g42680myosin-relatedS.X.H.G.
0.2747.1PtpAffx.32419.2.S1_atBP925545hypothetical protein-2e-13At4g37540LBD39 (LOB DOMAIN-CONTAINING PROTEIN 39)S.X.H.G.
0.2747.1PtpAffx.219504.1.S1_atpmrna35444hypothetical protein-3e-1At3g52930fructose-bisphosphate aldolase, putativeS.X.H.G.
0.2543.6PtpAffx.93279.1.A1_atDN491688hypothetical protein-4e+0At5g58900myb family transcription factorS.X.H.G.
0.2340.5PtpAffx.59925.1.S1_atCV256352hypothetical protein-2e+0At1g43720unknown proteinS.X.H.G.
0.2136.5PtpAffx.3081.1.S1_atDN491909hypothetical protein-1e+0At3g56380ARR17 (ARABIDOPSIS RESPONSE REGULATOR 17)S.X.H.G.
0.1932.7Ptp.4753.1.S1_atCV229896hypothetical protein-2e-1At3g24330glycosyl hydrolase family 17 proteinS.X.H.G.
0.1729.1PtpAffx.24328.3.A1_a_atCV242876hypothetical protein-1e-10At2g17770ATBZIP27S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.299.0GSM327281Populus balsamifera_20071015_Seedling_continuous_light_6d_1GSE13990Populus balsamifera developmental tissue series
8.398.5GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
6.697.9GSM327359Populus balsamifera_20071015_Seedling_continuous_light_6d_3GSE13990Populus balsamifera developmental tissue series
6.297.6GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
6.197.6GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
5.997.4GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue series
5.697.2GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue series
4.596.1GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
4.195.5GSM327398Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3GSE13990Populus balsamifera developmental tissue series
4.095.3GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.371e-131470PtpAffx.225592.1.S1_x_atpmrna45048hypothetical protein-1e-38At1g34300lectin protein kinase family proteinC.G.S.X.
0.371e-131470PtpAffx.225592.1.S1_s_atpmrna45048hypothetical protein-1e-38At1g34300lectin protein kinase family proteinC.G.S.X.
0.272e-86319PtpAffx.224962.1.S1_atpmrna43905hypothetical protein-3e-35At1g34300lectin protein kinase family proteinC.G.S.X.
0.272e-86319PtpAffx.224962.1.S1_x_atpmrna43905hypothetical protein-3e-35At1g34300lectin protein kinase family proteinC.G.S.X.
0.497e-53208PtpAffx.28535.1.S1_atCK103974hypothetical protein-2e+0At5g23405high mobility group (HMG1/2) family proteinC.G.S.X.
0.235e-35149PtpAffx.225591.1.S1_atpmrna45047hypothetical protein-6e-25At1g34300lectin protein kinase family proteinC.G.S.X.
0.211e-32141PtpAffx.224961.1.S1_atpmrna43904hypothetical protein-5e-38At1g34300lectin protein kinase family proteinC.G.S.X.
0.211e-32141PtpAffx.224961.1.S1_x_atpmrna43904hypothetical protein-5e-38At1g34300lectin protein kinase family proteinC.G.S.X.
0.167e-22105PtpAffx.64104.1.S1_atAJ774248hypothetical protein-9e-1At1g12064unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-1273Arabidopsis thalianaAt1g34300840330lectin protein kinase family proteinF:in 6 functions;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA---C.G.S.X.
0.222e-31137Glycine maxGmaAffx.87481.1.S1_atBM731259--7e-21At1g34300lectin protein kinase family proteinC.G.S.X.
0.061e-859Hordeum vulgareContig13905_atContig13905--3e-6At1g34300lectin protein kinase family proteinC.G.S.X.
0.038e-446Oryza sativaOs.18773.1.S1_at---0C.G.S.X.
0.063e-859Triticum aestivumTaAffx.6065.1.S1_s_atCA692255--5e-7At1g34300lectin protein kinase family proteinC.G.S.X.
0.047e-340Vitis vinifera1615423_atCF511936hypothetical protein LOC100263125-2e-1At3g63260ATMRK1C.G.S.X.
0.033e+032Zea maysZmAffx.1136.1.A1_atAW331220--3e+0At4g15460glycine-rich proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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