Gene omics information

Query gene ID PtpAffx.93050.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5683.9PtpAffx.93050.1.S1_atDN500932hypothetical protein-1e-7At3g48070protein binding / zinc ion bindingS.X.H.G.
0.5380.5PtpAffx.200524.1.S1_atpmrna1055hypothetical protein-1e-30At1g50170ATSIRB (ARABIDOPSIS THALIANA SIROHYDROCHLORIN FERROCHELATASE B)S.X.H.G.
0.5380.5PtpAffx.158765.2.S1_s_atCF118958hypothetical protein-8e-35At3g52950CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing proteinS.X.H.G.
0.4673.7Ptp.5383.1.S1_atAJ768686hypothetical protein-1e-32At5g22000RHF2A (RING-H2 GROUP F2A)S.X.H.G.
0.3661.6PtpAffx.212730.1.S1_atpmrna24902hypothetical protein-2e-12At3g47940DNAJ heat shock protein, putativeS.X.H.G.
0.3357.5PtpAffx.9076.2.S1_atBU809324hypothetical protein-2e-3At1g05820aspartic-type endopeptidase/ peptidaseS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.894.9GSM327398Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3GSE13990Populus balsamifera developmental tissue series
3.794.7GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
3.494.0GSM244430non infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.293.5GSM327380Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1GSE13990Populus balsamifera developmental tissue series
3.193.2GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.092.9GSM244433Mlp infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.992.5GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue series
2.992.5GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.791.8GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue series
2.490.4GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.122e-38161Ptp.2854.1.A1_atCV257270hypothetical protein-4e-1At4g32090galactosyltransferaseC.G.S.X.
0.135e-23109PtpAffx.80298.1.S1_atDN493473--2e+0At2g32280unknown proteinC.G.S.X.
0.073e-654PtpAffx.203386.1.S1_atpmrna6733hypothetical protein-8e-1At5g22360ATVAMP714 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 714)C.G.S.X.
0.024e-240PtpAffx.212369.1.S1_atpmrna24241hypothetical protein-5e-16At4g09460ATMYB6C.G.S.X.
0.026e-136PtpAffx.5646.1.A1_atCV240792--1e-1At1g16916unknown proteinC.G.S.X.
0.016e-136PtpAffx.210838.1.S1_atpmrna21282hypothetical protein-4e-2At5g63060transporterC.G.S.X.
0.012e+034PtpAffx.92734.1.S1_atCV267713hypothetical protein-5e-11At3g07565DNA bindingC.G.S.X.
0.022e+034PtpAffx.49655.1.A1_atDN496344hypothetical protein-6e+0At4g24290-C.G.S.X.
0.022e+034PtpAffx.222571.1.S1_s_atpmrna40086hypothetical protein-1e-16At3g11560unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.131e-757Arabidopsis thalianaAt3g48070823962protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:unknown;C:chloroplast;MFPOB---C.G.S.X.
0.036e-136Glycine maxGmaAffx.80474.1.S1_atAW707170--4e+0At3g50310MAPKKK20C.G.S.X.
0.038e-134Hordeum vulgareHVSMEn0012P04f2_atHVSMEn0012P04f2--2e-1At3g63030MBD4C.G.S.X.
0.039e-136Oryza sativaOs01g07851019629.m05644--2e-1At4g31380FLP1 (FPF1-LIKE PROTEIN 1)C.G.S.X.
0.031e-138Triticum aestivumTaAffx.50403.1.S1_atBG905740--7e-8At5g41685mitochondrial import receptor subunit TOM7 / translocase of outer membrane 7 kDa subunit (TOM7.1)C.G.S.X.
0.096e-1683Vitis vinifera1622318_atCF516494similar to putative anti-virus transcriptional factor-5e-3At3g48070protein binding / zinc ion bindingC.G.S.X.
0.032e-136Zea maysZm.6201.1.A1_atBE643575--1e-1At3g50690leucine-rich repeat family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage