Gene omics information

Query gene ID PtpAffx.9076.2.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4268.6PtpAffx.9076.2.S1_atBU809324hypothetical protein-2e-3At1g05820aspartic-type endopeptidase/ peptidaseS.X.H.G.
0.6791.1PtpAffx.200524.1.S1_atpmrna1055hypothetical protein-1e-30At1g50170ATSIRB (ARABIDOPSIS THALIANA SIROHYDROCHLORIN FERROCHELATASE B)S.X.H.G.
0.6388.1PtpAffx.93050.1.S1_atDN500932hypothetical protein-1e-7At3g48070protein binding / zinc ion bindingS.X.H.G.
0.4673.7Ptp.5383.1.S1_atAJ768686hypothetical protein-1e-32At5g22000RHF2A (RING-H2 GROUP F2A)S.X.H.G.
0.4067.0PtpAffx.158765.2.S1_s_atCF118958hypothetical protein-8e-35At3g52950CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing proteinS.X.H.G.
0.1525.3Ptp.6100.1.S1_s_atCV253262hypothetical protein-1e-13At3g57090BIGYINS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
2.791.8GSM244431non infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.691.3GSM327359Populus balsamifera_20071015_Seedling_continuous_light_6d_3GSE13990Populus balsamifera developmental tissue series
2.691.3GSM244435Mlp infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.590.9GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.389.8GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue series
2.389.8GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.389.8GSM327281Populus balsamifera_20071015_Seedling_continuous_light_6d_1GSE13990Populus balsamifera developmental tissue series
2.289.3GSM244430non infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.289.3GSM244436Mmd infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.289.3GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.133e-58226PtpAffx.9076.1.A1_atCV252324hypothetical protein-1e-30At2g43070protease-associated (PA) domain-containing proteinC.G.S.X.
0.016e-136PtpAffx.207979.1.S1_atpmrna15837--5e-15At1g68930pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.026e-136PtpAffx.200992.1.S1_s_atpmrna1952hypothetical protein-7e-29At3g27400pectate lyase family proteinC.G.S.X.
0.032e+034PtpAffx.92653.1.S1_atCK102908hypothetical protein-1e+0At3g58220-C.G.S.X.
0.012e+034PtpAffx.222501.1.S1_atpmrna39973hypothetical protein-1e-55At5g40390SIP1 (seed imbibition 1-like)C.G.S.X.
0.012e+034PtpAffx.211617.1.S1_atpmrna22764hypothetical protein-3e-16At3g61800-C.G.S.X.
0.012e+034PtpAffx.210680.1.S1_atpmrna20942hypothetical protein-2e-28At3g48770ATP binding / DNA bindingC.G.S.X.
0.012e+034PtpAffx.202267.1.S1_atpmrna4539hypothetical protein-1e-6At3g61800-C.G.S.X.
0.012e+034PtpAffx.200732.1.S1_atpmrna1408hypothetical protein-9e-20At5g58620zinc finger (CCCH-type) family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.062e-344Arabidopsis thalianaAt1g05820837092aspartic-type endopeptidase/ peptidaseF:peptidase activity, aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system, integral to membrane;MPOFB---C.G.S.X.
0.034e-240Glycine maxPsAffx.C22000037_s_atPsAffx.C22000037--2e-1At4g24370unknown proteinC.G.S.X.
0.031e+130Hordeum vulgareHW08C04u_atHW08C04u--6e-1At2g35490plastid-lipid associated protein PAP, putativeC.G.S.X.
0.038e-136Oryza sativaOs12g05941009640.m03935--6e-2At5g11930glutaredoxin family proteinC.G.S.X.
0.032e+034Triticum aestivumTa.28049.1.S1_s_atBJ300226--3e+0At5g18100CSD3 (copper/zinc superoxide dismutase 3)C.G.S.X.
0.032e+032Vitis vinifera1611805_a_atCF405901hypothetical protein LOC100252228-1e+0At3g60060-C.G.S.X.
0.031e+130Zea maysZmAffx.1301.1.S1_at40794996-29--2e-13Atmg00180-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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