Gene omics information

Query gene ID PtpAffx.8810.1.S1_at
Gene name AP2/ERF domain-containing transcription factor /// AP2/ERF domain-containing transcription factor
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.8810.1.S1_atCK096534AP2/ERF domain-containing transcription factor /// AP2/ERF domain-containing transcription factor-2e-34At1g21910AP2 domain-containing transcription factor family proteinS.X.H.G.
0.8397.0PtpAffx.30602.1.A1_atCV268363hypothetical protein-1e-4At5g17800AtMYB56 (myb domain protein 56)S.X.H.G.
0.7393.6PtpAffx.119343.1.A1_a_atBP933189hypothetical protein-4e-10At5g12010unknown proteinS.X.H.G.
0.6791.1PtpAffx.106356.1.S1_atCX660277AP2/ERF domain-containing transcription factor-5e+0At3g15050IQD10 (IQ-domain 10)S.X.H.G.
0.6388.1Ptp.3396.1.S1_atDN485474hypothetical protein-1e-5At3g50310MAPKKK20S.X.H.G.
0.5683.9Ptp.3396.1.S1_s_atDN485474hypothetical protein-1e-5At3g50310MAPKKK20S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
39.8100.0GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
34.699.9GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
3.293.5GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
2.590.9GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
1.482.3GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
1.279.6GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
0.974.2GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
0.974.2GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
0.872.0GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
0.872.0GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.742e-170599PtpAffx.205528.1.S1_atpmrna10927AP2/ERF domain-containing transcription factor-4e-23At1g21910AP2 domain-containing transcription factor family proteinC.G.S.X.
0.534e-67256PtpAffx.106356.1.S1_atCX660277AP2/ERF domain-containing transcription factor-5e+0At3g15050IQD10 (IQ-domain 10)C.G.S.X.
0.534e-67256PtpAffx.106356.1.S1_s_atCX660277AP2/ERF domain-containing transcription factor-9e-2At5g19800hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.038e-756PtpAffx.212540.1.S1_atpmrna24563hypothetical protein-7e-3At4g08900arginaseC.G.S.X.
0.022e-448PtpAffx.211920.1.S1_atpmrna23412hypothetical protein-2e-1At5g35770SAP (STERILE APETALA)C.G.S.X.
0.037e-446PtpAffx.212615.1.S1_atpmrna24699hypothetical protein-4e+0At5g28630glycine-rich proteinC.G.S.X.
0.047e-446PtpAffx.211786.1.S1_atpmrna23119hypothetical protein-3e+0At5g44578unknown proteinC.G.S.X.
0.027e-446PtpAffx.204524.1.S1_atpmrna8874hypothetical protein-4e-2At3g50550unknown proteinC.G.S.X.
0.017e-446PtpAffx.202736.1.S1_atpmrna5467hypothetical protein-2e-9At1g04030unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.182e-34147Arabidopsis thalianaAt1g21910838793AP2 domain-containing transcription factor family proteinencodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.---C.G.S.X.
0.055e-550Glycine maxGmaAffx.56121.1.A1_atBU544917--5e-2At1g34440unknown proteinC.G.S.X.
0.032e-240Hordeum vulgareContig26531_atContig26531--7e-5At3g50550unknown proteinC.G.S.X.
0.041e-346Oryza sativaOs12g02127009640.m01037--5e-2At3g17160unknown proteinC.G.S.X.
0.031e-138Triticum aestivumTaAffx.107125.1.S1_s_atCA705627--2e-1At3g42310unknown proteinC.G.S.X.
0.036e-444Vitis vinifera1618133_atCF404967hypothetical protein LOC100259114-2e-1At5g28610-C.G.S.X.
0.031e-240Zea maysZm.19029.1.A1_atCO530104Hypothetical protein LOC100217187-1e-3At3g50550unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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