Gene omics information

Query gene ID PtpAffx.85760.1.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5480.8PtpAffx.85760.1.S1_s_atCX181147hypothetical protein-6e-6At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)S.X.H.G.
0.8497.1PtpAffx.156707.1.S1_s_atBU873655hypothetical protein-4e-4At2g03110RNA binding / nucleic acid bindingS.X.H.G.
0.7895.1PtpAffx.120301.1.S1_s_atCF235521hypothetical protein-9e-2At1g54360TAF6B4 (TBP-ASSOCIATED FACTOR 6B4)S.X.H.G.
0.6791.1PtpAffx.132468.1.S1_s_atDN498520--4e-1At3g12140emsy N terminus domain-containing protein / ENT domain-containing proteinS.X.H.G.
0.6488.4PtpAffx.134857.2.S1_atCN523812hypothetical protein-2e-24At2g32080PUR ALPHA-1S.X.H.G.
0.6187.0PtpAffx.61544.1.A1_atCA931045hypothetical protein-4e-19At3g59380FTA (FARNESYLTRANSFERASE A)S.X.H.G.
0.6086.0PtpAffx.3977.1.S1_s_atCA821307hypothetical protein-2e-18At5g52040ATRSP41S.X.H.G.
0.5784.2PtpAffx.134857.1.S1_atCX185540hypothetical protein-2e-43At2g32080PUR ALPHA-1S.X.H.G.
0.3863.7PtpAffx.163432.1.S1_s_atBU812071hypothetical protein-6e-58At3g62120tRNA synthetase class II (G, H, P and S) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
2.892.1GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
2.892.1GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
2.791.8GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplar
2.791.8GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
2.791.8GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
2.691.3GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
2.490.4GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
2.389.8GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
2.188.6GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
2.088.0GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.4701009PtpAffx.218468.1.S1_atpmrna34094hypothetical protein-0At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)C.G.S.X.
0.083e-1583PtpAffx.3847.2.A1_atBP935435hypothetical protein-2e-159At1g13320PP2AA3 (PROTEIN PHOSPHATASE 2A SUBUNIT A3)C.G.S.X.
0.041e-757Ptp.1373.1.S1_s_atCF235734hypothetical protein-0At1g13320PP2AA3 (PROTEIN PHOSPHATASE 2A SUBUNIT A3)C.G.S.X.
0.109e-652PtpAffx.3847.4.A1_s_atBU820394hypothetical protein-2e-15At1g13320PP2AA3 (PROTEIN PHOSPHATASE 2A SUBUNIT A3)C.G.S.X.
0.012e+034PtpAffx.212440.1.S1_s_atpmrna24376hypothetical protein-4e-109At2g43770transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.012e+034PtpAffx.211484.1.S1_atpmrna22506hypothetical protein-7e-149At2g45540WD-40 repeat family protein / beige-relatedC.G.S.X.
0.028e+032PtpAffx.3400.3.S1_atDN492271hypothetical protein-1e-10At1g74450unknown proteinC.G.S.X.
0.028e+032PtpAffx.217303.1.S1_atpmrna32505hypothetical protein-5e+0At4g19550transcription regulator/ zinc ion bindingC.G.S.X.
0.018e+032PtpAffx.206016.1.S1_atpmrna11924hypothetical protein-1e-9At3g56860UBP1 interacting protein 2a (UBA2a)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.116e-652Arabidopsis thalianaAt3g25800822171PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)one of three genes encoding the protein phosphatase 2A regulatory subunit---C.G.S.X.
0.051e-138Glycine maxGma.7498.3.S1_atCA800433--4e-71At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)C.G.S.X.
0.031e-240Hordeum vulgareHF24C10r_atHF24C10r--1e+1At5g53610glycosyl hydrolase family protein 17C.G.S.X.
0.043e-344Oryza sativaOs09g0249700AK069757.1-Protein phosphatase 2A A subunit (Phosphatase 2Aregulatory A subunit)3e-87At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)C.G.S.X.
0.036e+032Triticum aestivumTa.16220.1.S1_atCA602811--1e+1At5g43380TOPP6C.G.S.X.
0.392e-31135Vitis vinifera1612881_atBQ795786--4e-35At1g25490RCN1 (ROOTS CURL IN NPA)C.G.S.X.
0.021e-240Zea maysZm.3442.1.A1_atAY103732.1hypothetical protein LOC100273117-9e-9At1g06680PSBP-1 (PHOTOSYSTEM II SUBUNIT P-1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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