Gene omics information

Query gene ID PtpAffx.80080.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8397.0PtpAffx.80080.1.S1_atCX181327hypothetical protein-2e-22At2g43320unknown proteinS.X.H.G.
0.5380.5PtpAffx.140448.1.A1_atCV254554hypothetical protein-9e-18At2g13650GONST1 (Golgi Nucleotide Sugar Transporter 1)S.X.H.G.
0.4471.9PtpAffx.46278.1.S1_atCK318821--2e-14At1g28510-S.X.H.G.
0.3458.3PtpAffx.212573.1.S1_atpmrna24632hypothetical protein-2e-40At5g53050hydrolase, alpha/beta fold family proteinS.X.H.G.
0.3357.5PtpAffx.5931.2.S1_a_atCV275358hypothetical protein-6e+0At5g42330unknown proteinS.X.H.G.
0.1830.8PtpAffx.147997.1.S1_a_atBU875360hypothetical protein-1e-14At2g19160unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.199.3GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
6.898.0GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
5.497.0GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
5.396.9GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
3.694.5GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
3.494.0GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.092.9GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
3.092.9GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
2.791.8GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
2.691.3GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.500779PtpAffx.37983.1.A1_atCV231206hypothetical protein-3e-11At2g43320unknown proteinC.G.S.X.
0.284e-71270PtpAffx.80080.2.S1_atDN491610hypothetical protein-6e-2At2g43320unknown proteinC.G.S.X.
0.011e+036PtpAffx.225651.1.S1_atpmrna45143hypothetical protein-1e+0At2g36870xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeC.G.S.X.
0.011e+036PtpAffx.224155.1.S1_atpmrna42426cytochrome P450-2e-7At4g31940CYP82C4C.G.S.X.
0.024e+034PtpAffx.50347.1.S1_atCX172783hypothetical protein-2e-21At1g36730eukaryotic translation initiation factor 5, putative / eIF-5, putativeC.G.S.X.
0.024e+034PtpAffx.46092.1.S1_atCX170150--7e-24At2g14045unknown proteinC.G.S.X.
0.014e+034PtpAffx.216991.1.S1_atpmrna32089hypothetical protein-7e-1At1g44790ChaC-like family proteinC.G.S.X.
0.014e+034PtpAffx.216991.1.S1_x_atpmrna32089hypothetical protein-7e-1At1g44790ChaC-like family proteinC.G.S.X.
0.024e+034PtpAffx.215152.1.S1_atpmrna29190hypothetical protein-1e+0At1g73040jacalin lectin family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.332e-22107Arabidopsis thalianaAt2g43320818933unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MPOFB---C.G.S.X.
0.359e-29129Glycine maxGma.4615.1.S1_atBU761246--1e-4At2g43320unknown proteinC.G.S.X.
0.022e-240Hordeum vulgareContig13189_atContig13189--7e-5At5g67640unknown proteinC.G.S.X.
0.186e-1273Oryza sativaOs04g0492400AK099916.1-Conserved hypothetical protein3e-10At2g43320unknown proteinC.G.S.X.
0.141e-1481Triticum aestivumTa.4911.2.S1_atBQ171645--4e-6At2g43320unknown proteinC.G.S.X.
0.021e-240Vitis vinifera1614620_atCF404986hypothetical protein LOC100249044-5e-37At5g37310-C.G.S.X.
0.015e+032Zea maysZm.9600.1.A1_atBM348200hypothetical protein LOC100275696-5e+0At2g15130plant basic secretory protein (BSP) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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